Spl1-SPL01F110029
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCATCCAGAGGTTTAAAGAAGTTGAAAAGACTGAAGGAGACATGACCGTTCAGTGCCAC TACTGCACTCACTATTCCTCAGCCATCATTGTCGCCTCCTACCTGGTCCGGATGCCACCC TTCACCCAGGCCTTCTGCTCTCTGCAGGGTGGAAGCTTCGATGTGGCAGATAGAATGTTC CACAGCATGAAGAATGCATGGGAGTCAGCCTCCAGAGAGAACATGAGTGACGTCAGGGAG CTGACCCCAGAGTTCTTCTACCTGCCCGAGTTCCTGACCAACTGCAACGCACTGGAGTTT GGCTGCATGCAGGATGGAACAGCACTGGGAGACGTGCAACTCCCTCCCTGGGCTGATGGG GACCCTCGGAAATTCATCAGCCTGCACAGACAGGCTTTGGAAAGTGACTTTGTCAGTGCC AACCTGCACCACTGGATAGACCTCATTTTTGGGTACAAGCAGCAGGGCTCAGCCGCAGTG GAGGCTGTTAACACCTTCCACCCTTACTTCTACGGTGACAAAATGGACCTCGGCAGCATC AGAGACCCGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCATCCAGAGGTTTAAAGAAGTTGAAAAGACTGAAGGAGACATGACCGTTCAGTGCCAC TACTGCACTCACTATTCCTCAGCCATCATTGTCGCCTCCTACCTGGTCCGGATGCCACCC TTCACCCAGGCCTTCTGCTCTCTGCAGGGTGGAAGCTTCGATGTGGCAGATAGAATGTTC CACAGCATGAAGAATGCATGGGAGTCAGCCTCCAGAGAGAACATGAGTGACGTCAGGGAG CTGACCCCAGAGTTCTTCTACCTGCCCGAGTTCCTGACCAACTGCAACGCACTGGAGTTT GGCTGCATGCAGGATGGAACAGCACTGGGAGACGTGCAACTCCCTCCCTGGGCTGATGGG GACCCTCGGAAATTCATCAGCCTGCACAGACAGGCTTTGGAAAGTGACTTTGTCAGTGCC AACCTGCACCACTGGATAGACCTCATTTTTGGGTACAAGCAGCAGGGCTCAGCCGCAGTG GAGGCTGTTAACACCTTCCACCCTTACTTCTACGGTGACAAAATGGACCTCGGCAGCATC AGAGACCCGCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 146-264, + strand, RNAz p=0.847176 | |
| 146-264, + strand, RNAz p=0.557818 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 146-264, + strand, RNAz p=0.847176 | |
| 146-264, + strand, RNAz p=0.557818 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 146-302, gnl|bosTau2|chr28 (29181701-29181545) | |
| 146-302, gnl|canFam2|chr28 (3869564-3869732) | |
| 146-302, gnl|danRer3|chr13 (32225552-32225390) | |
| 146-302, gnl|dasNov1|scaffold_267439 (3661-3827) | |
| 146-302, gnl|echTel1|scaffold_172574 (3995-3829) | |
| 146-302, gnl|fr1|chrUn (16410511-16410671) | |
| 146-302, gnl|galGal2|chr6 (17698948-17699111) | |
| 146-302, gnl|hg17|chr10 (49835178-49835346) | |
| 146-302, gnl|Hg17|chr10 (49835178-49835334) | |
| 146-302, gnl|loxAfr1|scaffold_1559 (27071-27239) | |
| 146-302, gnl|mm7|chr14 (30408597-30408429) | |
| 146-302, gnl|Mm7|chr14 (30408595-30408439) | |
| 146-302, gnl|monDom2|scaffold_14 (20134673-20134835) | |
| 146-302, gnl|oryCun1|scaffold_144209 (3913-3745) | |
| 146-302, gnl|rheMac2|chr9 (47659811-47659643) | |
| 146-302, gnl|rn3|chr16 (8503210-8503042) | |
| 146-302, gnl|tetNig1|chrUn_random (120477275-120477412) | |
| 146-302, gnl|xenTro1|scaffold_404 (154197-154359) | |
| 391-551, gnl|bosTau2|chr28 (29177355-29177195) | |
| 391-551, gnl|canFam2|chr28 (3879651-3879853) | |
| 391-551, gnl|danRer3|chr13 (32224278-32224093) | |
| 391-551, gnl|dasNov1|scaffold_5983 (95108-94906) | |
| 391-551, gnl|echTel1|scaffold_324627 (87719-87921) | |
| 391-551, gnl|fr1|chrUn (16411846-16412046) | |
| 391-551, gnl|galGal2|chr6 (17704665-17704864) | |
| 391-551, gnl|hg17|chr10 (49841859-49842061) | |
| 391-551, gnl|Hg17|chr10 (49841890-49842050) | |
| 391-551, gnl|loxAfr1|scaffold_48771 (31301-31503) | |
| 391-551, gnl|mm7|chr14 (30405751-30405551) | |
| 391-551, gnl|Mm7|chr14 (30405720-30405560) | |
| 391-551, gnl|monDom2|scaffold_14 (20146346-20146541) | |
| 391-551, gnl|oryCun1|scaffold_144209 (2451-2249) | |
| 391-551, gnl|panTro1|chr8 (50172885-50173088) | |
| 391-551, gnl|rheMac2|chr9 (47653296-47653094) | |
| 391-551, gnl|rn3|chr16 (8500079-8499877) | |
| 391-551, gnl|tetNig1|chrUn_random (120478704-120478879) | |
| 391-551, gnl|xenTro1|scaffold_404 (155652-155834) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 146-302, gnl|bosTau2|chr28 (29181701-29181545) | |
| 146-302, gnl|canFam2|chr28 (3869564-3869732) | |
| 146-302, gnl|danRer3|chr13 (32225552-32225390) | |
| 146-302, gnl|dasNov1|scaffold_267439 (3661-3827) | |
| 146-302, gnl|echTel1|scaffold_172574 (3995-3829) | |
| 146-302, gnl|fr1|chrUn (16410511-16410671) | |
| 146-302, gnl|galGal2|chr6 (17698948-17699111) | |
| 146-302, gnl|hg17|chr10 (49835178-49835346) | |
| 146-302, gnl|Hg17|chr10 (49835178-49835334) | |
| 146-302, gnl|loxAfr1|scaffold_1559 (27071-27239) | |
| 146-302, gnl|mm7|chr14 (30408597-30408429) | |
| 146-302, gnl|Mm7|chr14 (30408595-30408439) | |
| 146-302, gnl|monDom2|scaffold_14 (20134673-20134835) | |
| 146-302, gnl|oryCun1|scaffold_144209 (3913-3745) | |
| 146-302, gnl|rheMac2|chr9 (47659811-47659643) | |
| 146-302, gnl|rn3|chr16 (8503210-8503042) | |
| 146-302, gnl|tetNig1|chrUn_random (120477275-120477412) | |
| 146-302, gnl|xenTro1|scaffold_404 (154197-154359) | |
| 391-551, gnl|bosTau2|chr28 (29177355-29177195) | |
| 391-551, gnl|canFam2|chr28 (3879651-3879853) | |
| 391-551, gnl|danRer3|chr13 (32224278-32224093) | |
| 391-551, gnl|dasNov1|scaffold_5983 (95108-94906) | |
| 391-551, gnl|echTel1|scaffold_324627 (87719-87921) | |
| 391-551, gnl|fr1|chrUn (16411846-16412046) | |
| 391-551, gnl|galGal2|chr6 (17704665-17704864) | |
| 391-551, gnl|hg17|chr10 (49841859-49842061) | |
| 391-551, gnl|Hg17|chr10 (49841890-49842050) | |
| 391-551, gnl|loxAfr1|scaffold_48771 (31301-31503) | |
| 391-551, gnl|mm7|chr14 (30405751-30405551) | |
| 391-551, gnl|Mm7|chr14 (30405720-30405560) | |
| 391-551, gnl|monDom2|scaffold_14 (20146346-20146541) | |
| 391-551, gnl|oryCun1|scaffold_144209 (2451-2249) | |
| 391-551, gnl|panTro1|chr8 (50172885-50173088) | |
| 391-551, gnl|rheMac2|chr9 (47653296-47653094) | |
| 391-551, gnl|rn3|chr16 (8500079-8499877) | |
| 391-551, gnl|tetNig1|chrUn_random (120478704-120478879) | |
| 391-551, gnl|xenTro1|scaffold_404 (155652-155834) |