Spl1-SPL01G020086
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GCCTACTGGTTTTAAGCCTCTTACAGAAACTTTGATCTAGTACCGTTTATGTACTTTCAA
ATCAGAATGTAAATTACTCCTTTTCACCATACTTATTTGGATGTCACAAGATACCTTTAT
TTAAAGGTTGTAAGGTCAGACTTCCAGCTCATAATTTAGCCAAATACATGTATTCAGAAT
CAGACATTAGTCTTCTACTCTGTGTGTGGTAGAGTCTTTACAGTGCGAATGCAGAATCAT
AGTGTAGTCACAGAACTCCACTGATTGTTACAGAAAATTGGTATTTCTAAATTCTGGAGT
CCTTTTACTTCTTTGACTTCATGTTGCCCAGAACTGCCTGTGATTCTGAGTACTTTATGG
AGTGGTATTTGGGGCTGTTCAATTGTGCTTTTGAAAAAAATATTTTTTTCTCTTTAAATG
TTTGGTTAAAATACTAGCTTATATTTTAAACTGCTTGGAAAAGCTTTGTTGTTGTTGTTT
TTCCCAGTGTGTTGAGATTAAATTTAAATTTCAGGTTTAAATTTTCCTTGCTTTGTTTGA
TGGGAAATTGAAAGGTTTCTTTTTCTCTACTACTTACTGATTGCTCTACCACTGGGCCTG
ATTTTCCTTTTGTGAGACATCACACTTGGCAACTTAATAGAGGAAGAAATAAACATTCAA
ATGTTTTGTATGATTTTAGAGCATTAAACACAGACACATACACACACTTGTTCCCTTTAA
TTTAGGA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCCTACTGGTTTTAAGCCTCTTACAGAAACTTTGATCTAGTACCGTTTATGTACTTTCAA
ATCAGAATGTAAATTACTCCTTTTCACCATACTTATTTGGATGTCACAAGATACCTTTAT
TTAAAGGTTGTAAGGTCAGACTTCCAGCTCATAATTTAGCCAAATACATGTATTCAGAAT
CAGACATTAGTCTTCTACTCTGTGTGTGGTAGAGTCTTTACAGTGCGAATGCAGAATCAT
AGTGTAGTCACAGAACTCCACTGATTGTTACAGAAAATTGGTATTTCTAAATTCTGGAGT
CCTTTTACTTCTTTGACTTCATGTTGCCCAGAACTGCCTGTGATTCTGAGTACTTTATGG
AGTGGTATTTGGGGCTGTTCAATTGTGCTTTTGAAAAAAATATTTTTTTCTCTTTAAATG
TTTGGTTAAAATACTAGCTTATATTTTAAACTGCTTGGAAAAGCTTTGTTGTTGTTGTTT
TTCCCAGTGTGTTGAGATTAAATTTAAATTTCAGGTTTAAATTTTCCTTGCTTTGTTTGA
TGGGAAATTGAAAGGTTTCTTTTTCTCTACTACTTACTGATTGCTCTACCACTGGGCCTG
ATTTTCCTTTTGTGAGACATCACACTTGGCAACTTAATAGAGGAAGAAATAAACATTCAA
ATGTTTTGTATGATTTTAGAGCATTAAACACAGACACATACACACACTTGTTCCCTTTAA
TTTAGGA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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10-359, gnl|bosTau2|chr27 (22203551-22203199) |
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10-359, gnl|Hg17|chr8 (41469390-41469741) |
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403-699, gnl|bosTau2|chr27 (22202866-22202548) |
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403-699, gnl|canFam2|chr16 (27053462-27052972) |
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403-699, gnl|dasNov1|scaffold_19444 (7783-8254) |
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403-699, gnl|echTel1|scaffold_310081 (145488-145002) |
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403-699, gnl|hg17|chr8 (41469784-41470255) |
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403-699, gnl|Hg17|chr8 (41469791-41470092) |
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403-699, gnl|loxAfr1|scaffold_172260 (3888-4349) |
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403-699, gnl|mm7|chr8 (22040169-22039728) |
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403-699, gnl|monDom2|scaffold_1 (80742108-80741643) |
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403-699, gnl|oryCun1|scaffold_176677 (13351-12936) |
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403-699, gnl|panTro1|chr7 (42889051-42889522) |
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403-699, gnl|rheMac2|chr8 (42059631-42060121) |
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403-699, gnl|rn3|chr16 (73228124-73228539) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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10-359, gnl|bosTau2|chr27 (22203551-22203199) |
|
10-359, gnl|Hg17|chr8 (41469390-41469741) |
| |
|
403-699, gnl|bosTau2|chr27 (22202866-22202548) |
|
403-699, gnl|canFam2|chr16 (27053462-27052972) |
|
403-699, gnl|dasNov1|scaffold_19444 (7783-8254) |
|
403-699, gnl|echTel1|scaffold_310081 (145488-145002) |
|
403-699, gnl|hg17|chr8 (41469784-41470255) |
|
403-699, gnl|Hg17|chr8 (41469791-41470092) |
|
403-699, gnl|loxAfr1|scaffold_172260 (3888-4349) |
|
403-699, gnl|mm7|chr8 (22040169-22039728) |
|
403-699, gnl|monDom2|scaffold_1 (80742108-80741643) |
|
403-699, gnl|oryCun1|scaffold_176677 (13351-12936) |
|
403-699, gnl|panTro1|chr7 (42889051-42889522) |
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403-699, gnl|rheMac2|chr8 (42059631-42060121) |
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403-699, gnl|rn3|chr16 (73228124-73228539) |
