Non-Coding RNA Search

Spl1-SPL01G070048

Sequence:


               
               TCAGCTGCCTCCTCCAGGAGGTAGGATGATACCACCCAGCCTGCAGGCCTGGACACCAGT
GATGGCATGTGGATAACATCTGGCTGGAGCACAGGGAGGGTCCTTGTGAGTCATTGGATC
CGTGGTGTTCTGCTATCCCTGGTACCCAACCACCCCCCTGCACTCCTGCCACCACCACCA
TTAGTCAATAATGAACCTCTCTTGGTCAGCAGCAGGGTGGCTGCTAAGAAACCCTGGCCA
TAGTAATAGAGGTATCAAGTCTCAATCGAAGGAGGTGATAATCTACTCTAAATCCCCAGG
GGCAGAATCAGGATGAATGGGAGCCACATTGGGCTCAGCATGATGGTGAGCACTTAGAGA
GTCACTCCACAAAGCAGGGAGCACCTCAAATGGGGAGGCATGTAAGCAAGAGGGCTTGGA
CCTTGGTGGGAGGGCTCGCAAGGGCCAGGTGATGCCTCCATGTTCATCCCTGCCCACCCT
CCCTGACAGAGGCCGCTGGAGCCCCCAGGCAAGTCCTTTCCTGCTCTTCTCTCCTGAGCT
CCTCAGACCTGAGATAGCCCCTTCTTTGGCTGAGCTCTCAGGGGAAAGGAGGGCATAGGT
GGAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGCTGCCTCCTCCAGGAGGTAGGATGATACCACCCAGCCTGCAGGCCTGGACACCAGT
GATGGCATGTGGATAACATCTGGCTGGAGCACAGGGAGGGTCCTTGTGAGTCATTGGATC
CGTGGTGTTCTGCTATCCCTGGTACCCAACCACCCCCCTGCACTCCTGCCACCACCACCA
TTAGTCAATAATGAACCTCTCTTGGTCAGCAGCAGGGTGGCTGCTAAGAAACCCTGGCCA
TAGTAATAGAGGTATCAAGTCTCAATCGAAGGAGGTGATAATCTACTCTAAATCCCCAGG
GGCAGAATCAGGATGAATGGGAGCCACATTGGGCTCAGCATGATGGTGAGCACTTAGAGA
GTCACTCCACAAAGCAGGGAGCACCTCAAATGGGGAGGCATGTAAGCAAGAGGGCTTGGA
CCTTGGTGGGAGGGCTCGCAAGGGCCAGGTGATGCCTCCATGTTCATCCCTGCCCACCCT
CCCTGACAGAGGCCGCTGGAGCCCCCAGGCAAGTCCTTTCCTGCTCTTCTCTCCTGAGCT
CCTCAGACCTGAGATAGCCCCTTCTTTGGCTGAGCTCTCAGGGGAAAGGAGGGCATAGGT
GGAGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               80-273, - strand, RNAz p=0.996001

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-273, - strand, RNAz p=0.996001

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-446, gnl|bosTau2|chrX (8074618-8075059)
               

               
               1-446, gnl|Hg17|chr1 (24989352-24988926)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-446, gnl|bosTau2|chrX (8074618-8075059)
               

               
               1-446, gnl|Hg17|chr1 (24989352-24988926)

	1-446, gnl\|bosTau2\|chrX (8074618-8075059)
	1-446, gnl\|Hg17\|chr1 (24989352-24988926)