Spl1-SPL01G110051
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGGCCAGAAGTCCCTCGGTTCTGATCTGGGGAGCCAAGACAGGAAACTCTGGTAAGCT TCTGCCTCTCCCCTCATGGAAAGCCACTGGTGCAGCTGACAGAGGGCAGGGTCTATTCCG AGCTCCCCTGATGCACTGCAGCTGGAAGGCAACAGCTCACTTCCAGGCTGTGGGAATGAT CCCAGAGAGCCCGGCACCACGAGTCGGTTTAACAAGGACATATCAAAGGAAGGGACGAGG AGAGGGTGGCAAACTGGGACACCTTTTAGCTACCTTGCTTGCGTTTCCAGACTCAGGCGA ACAGCCCAGGACTGATTTCAGCCAAATCTCAGGGACTGGCCCCATCTCGTACTCTGACCC CACCAAGCAGGACATCTTCAGGTGGAAGGGGAAAAAAAAGCCAGACCTCCTCACCGCTCC CACCGGGCTGTACCACCTTCCCCACGATACTGCCAGCCTCTCACCGAGAAGGGAGAGGCT GCCCCAGCAATTTCAGTAAACACGTCGCTTAGCACCACCTGGCAACTGAGAACCTTGATC TCTCCCGACCCCAGACGCCGAGGACCGCACAACACAAAACCCGGGCCAGTTGTAGCCGAC CAAACTGCAGTGTCACTATCGTGGGGTGGTTGGGGAGGGGAGGAACGGGGGGATCCATGT GAGAGACAGACAGAATAAAGGGAAAGAAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGGCCAGAAGTCCCTCGGTTCTGATCTGGGGAGCCAAGACAGGAAACTCTGGTAAGCT TCTGCCTCTCCCCTCATGGAAAGCCACTGGTGCAGCTGACAGAGGGCAGGGTCTATTCCG AGCTCCCCTGATGCACTGCAGCTGGAAGGCAACAGCTCACTTCCAGGCTGTGGGAATGAT CCCAGAGAGCCCGGCACCACGAGTCGGTTTAACAAGGACATATCAAAGGAAGGGACGAGG AGAGGGTGGCAAACTGGGACACCTTTTAGCTACCTTGCTTGCGTTTCCAGACTCAGGCGA ACAGCCCAGGACTGATTTCAGCCAAATCTCAGGGACTGGCCCCATCTCGTACTCTGACCC CACCAAGCAGGACATCTTCAGGTGGAAGGGGAAAAAAAAGCCAGACCTCCTCACCGCTCC CACCGGGCTGTACCACCTTCCCCACGATACTGCCAGCCTCTCACCGAGAAGGGAGAGGCT GCCCCAGCAATTTCAGTAAACACGTCGCTTAGCACCACCTGGCAACTGAGAACCTTGATC TCTCCCGACCCCAGACGCCGAGGACCGCACAACACAAAACCCGGGCCAGTTGTAGCCGAC CAAACTGCAGTGTCACTATCGTGGGGTGGTTGGGGAGGGGAGGAACGGGGGGATCCATGT GAGAGACAGACAGAATAAAGGGAAAGAAAG |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-119, - strand, RNAz p=0.589226 | |
| 34-126, - strand, RNAz p=0.65461 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, - strand, RNAz p=0.589226 | |
| 34-126, - strand, RNAz p=0.65461 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-385, gnl|bosTau2|chr29 (12961231-12961613) | |
| 1-385, gnl|canFam2|chr21 (23420429-23419517) | |
| 1-385, gnl|hg17|chr11 (77804833-77805722) | |
| 1-385, gnl|Hg17|chr11 (77805085-77805465) | |
| 1-385, gnl|loxAfr1|scaffold_6581 (45597-46509) | |
| 1-385, gnl|mm7|chr7 (93114730-93113902) | |
| 1-385, gnl|Mm7|chr7 (93114465-93114130) | |
| 1-385, gnl|oryCun1|scaffold_91917 (3926-3030) | |
| 1-385, gnl|panTro1|chr9 (79117717-79118605) | |
| 1-385, gnl|rheMac2|chr14 (76613721-76614610) | |
| 1-385, gnl|rn3|chr1 (154428613-154427777) | |
| 401-629, gnl|bosTau2|chr29 (12961652-12961878) | |
| 401-629, gnl|canFam2|chr21 (23420429-23419517) | |
| 401-629, gnl|hg17|chr11 (77804833-77805722) | |
| 401-629, gnl|Hg17|chr11 (77805494-77805719) | |
| 401-629, gnl|loxAfr1|scaffold_6581 (45597-46509) | |
| 401-629, gnl|mm7|chr7 (93114730-93113902) | |
| 401-629, gnl|Mm7|chr7 (93114109-93113903) | |
| 401-629, gnl|oryCun1|scaffold_91917 (3926-3030) | |
| 401-629, gnl|panTro1|chr9 (79117717-79118605) | |
| 401-629, gnl|rheMac2|chr14 (76613721-76614610) | |
| 401-629, gnl|rn3|chr1 (154428613-154427777) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-385, gnl|bosTau2|chr29 (12961231-12961613) | |
| 1-385, gnl|canFam2|chr21 (23420429-23419517) | |
| 1-385, gnl|hg17|chr11 (77804833-77805722) | |
| 1-385, gnl|Hg17|chr11 (77805085-77805465) | |
| 1-385, gnl|loxAfr1|scaffold_6581 (45597-46509) | |
| 1-385, gnl|mm7|chr7 (93114730-93113902) | |
| 1-385, gnl|Mm7|chr7 (93114465-93114130) | |
| 1-385, gnl|oryCun1|scaffold_91917 (3926-3030) | |
| 1-385, gnl|panTro1|chr9 (79117717-79118605) | |
| 1-385, gnl|rheMac2|chr14 (76613721-76614610) | |
| 1-385, gnl|rn3|chr1 (154428613-154427777) | |
| 401-629, gnl|bosTau2|chr29 (12961652-12961878) | |
| 401-629, gnl|canFam2|chr21 (23420429-23419517) | |
| 401-629, gnl|hg17|chr11 (77804833-77805722) | |
| 401-629, gnl|Hg17|chr11 (77805494-77805719) | |
| 401-629, gnl|loxAfr1|scaffold_6581 (45597-46509) | |
| 401-629, gnl|mm7|chr7 (93114730-93113902) | |
| 401-629, gnl|Mm7|chr7 (93114109-93113903) | |
| 401-629, gnl|oryCun1|scaffold_91917 (3926-3030) | |
| 401-629, gnl|panTro1|chr9 (79117717-79118605) | |
| 401-629, gnl|rheMac2|chr14 (76613721-76614610) | |
| 401-629, gnl|rn3|chr1 (154428613-154427777) |