Ss1.1-4cip-UMC-p4civp1-008-a10.3
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CCTGGGCCCTGTGGTCAACGTGACCAATCGTACCAACGTTCACGTGCGGCTTGGTCCGCT
CGAACTTTTCCTTTGCCATGTCGCGACTCCTGTCTCGGTAGCGATTTGCGTTGGTGGATG
CGTGGTGCCCATGGGCAGGATCGAACTGCCGACCTCTCCCTTACCAAGGGAGTGCTCTAC
CACTGAGCCACATGGGCAAAACTTGCTAACAGTGAATGGAGCGGGTGAAGGGAATCGAAC
CCTCGTCGTAAGCTTGGAAGGCTTCTGCTCTACCATTGAGCTACACCCGCCCGGGTTACT
ACTTCCCTTGCCGCCCGGCCTTGCGACCGAACTCACTGCTTAATTCTGGTGGAAAGGGTT
GGATTCGAACCAACGTAGGCGTAAGCCAACAGATTTACAGTCTGCCCCCTTTAGCCACTC
GGGCACCTCTCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CCTGGGCCCTGTGGTCAACGTGACCAATCGTACCAACGTTCACGTGCGGCTTGGTCCGCT
CGAACTTTTCCTTTGCCATGTCGCGACTCCTGTCTCGGTAGCGATTTGCGTTGGTGGATG
CGTGGTGCCCATGGGCAGGATCGAACTGCCGACCTCTCCCTTACCAAGGGAGTGCTCTAC
CACTGAGCCACATGGGCAAAACTTGCTAACAGTGAATGGAGCGGGTGAAGGGAATCGAAC
CCTCGTCGTAAGCTTGGAAGGCTTCTGCTCTACCATTGAGCTACACCCGCCCGGGTTACT
ACTTCCCTTGCCGCCCGGCCTTGCGACCGAACTCACTGCTTAATTCTGGTGGAAAGGGTT
GGATTCGAACCAACGTAGGCGTAAGCCAACAGATTTACAGTCTGCCCCCTTTAGCCACTC
GGGCACCTCTCC
|
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350-432, RF00005;tRNA; (AL646073.1/73404-73322), blast E-value=2e-38 |
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197-126, tRNA Gly : RF00005;tRNA; (BX321857.1/149760-149831), RaveNnA
Score=76.03 |
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290-220, tRNA Gly : RF00005;tRNA; (AF088896.1/23359-23429), RaveNnA Score=73.83 |
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432-350, tRNA Gly : RF00005;tRNA; (AL646073.1/73404-73322), RaveNnA Score=57.99 |
PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)
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350-432, RF00005;tRNA; (AL646073.1/73404-73322), blast E-value=2e-38 |
|
197-126, tRNA Gly : RF00005;tRNA; (BX321857.1/149760-149831), RaveNnA
Score=76.03 |
|
290-220, tRNA Gly : RF00005;tRNA; (AF088896.1/23359-23429), RaveNnA Score=73.83 |
|
432-350, tRNA Gly : RF00005;tRNA; (AL646073.1/73404-73322), RaveNnA Score=57.99 |
