Non-Coding RNA Search

Ss1.1-Blo1-PBL010025A10.5

Sequence:


               
               AGTTTTCGCTGAGGAGAAGAACGAAACGGACCCGTTGGCTCTCCTCCTCCCTTTCCCCGC
CCTGAACCCCCCTCCTGGCTCGCCGGGAATTCGTCTCCGTGGAGTTTCCCCTCCACCTCG
CCGCCTTTTCCTCGGCCCTCGGCTCGCTGGAAGTCTCTGCCCTCGAGGAGGAGGCAGCGG
CAGCCGCCCTCGCCTGCCGCCCCCGGTTCGGTGCCCGCGGTCCCGGAGAGGAGGTGCCGC
CGCCACCGCCGCTCCCCCCCTCCCGCTGCCCTCGGGCCGGGCTGGGTCGAGCTGCGATGC
CCTCGGACTTCATCTCATTGCTCAGCGCGGACCTAGACCTGGAGTCGCCCAAGTCCCTGT
ACTCGCGAGAATCTGTCTATGATCTTCTCCCAAAGGAGTTACGGTTACCTCCATCTAGAG
AAACATCTGTAGCATCAATGAGTCAGACAAGTGGTGGTGAGGCAGGCTCGCCTCCTCCAG
CTGTAGTTGCTGTAGATGCTTCTTCAGCTCCCTCCTCTTCCTCCATGGGCGGTGCTTGCA
GCTCCTTTACCACCTCTTCCAGCCCTACCATTTATTCTACCTCAGTCACCGACAGCAAGG
CTATGCAAGTGGAGAGCTGCTCCTCAGCCTTGGGGGTAAGTAACCGAGGGGTAAGTGAAA
AGCAGTTAACCAGTAACACAGTTCAGCAGCATCCATCAACCCCGAAGAGGCACACAGTCT
TGTACATCTCACCACCACCTGAGGACTTGCTGGATAACAGTCGGATGTCCTGCCAGGATG
AGGGGTGTGGATTGGAATCTGAGCAGAGCTGCAGTATGTGGATGGAGGATTCCCCCTCCA
ACTTCAGTAACATGAGCACCAGTTCCTACAATGATAACACTGAGGTACCTCGTAAATCAC
GAAAACGAAATCCAAAGCAGAGGCCGGGGGTCAAACGACGAGATTGTGAAGAATCTAACA
TGGATATATTTGATGCCGACAGTGCCAAAGCACCTCACTATGTGCTTTCTCAGCTTACCA
CGGACAACAAAGGCAACTCAAAAGCAGGAAATGGATATATCTTATAAATGATTTGAGGTT
ACCCAGGGAAAGTATAATAACATTTGTCAAGACAAAAATCTCTCATGAAATAATTCATGG
AACAGAAACTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTTTTCGCTGAGGAGAAGAACGAAACGGACCCGTTGGCTCTCCTCCTCCCTTTCCCCGC
CCTGAACCCCCCTCCTGGCTCGCCGGGAATTCGTCTCCGTGGAGTTTCCCCTCCACCTCG
CCGCCTTTTCCTCGGCCCTCGGCTCGCTGGAAGTCTCTGCCCTCGAGGAGGAGGCAGCGG
CAGCCGCCCTCGCCTGCCGCCCCCGGTTCGGTGCCCGCGGTCCCGGAGAGGAGGTGCCGC
CGCCACCGCCGCTCCCCCCCTCCCGCTGCCCTCGGGCCGGGCTGGGTCGAGCTGCGATGC
CCTCGGACTTCATCTCATTGCTCAGCGCGGACCTAGACCTGGAGTCGCCCAAGTCCCTGT
ACTCGCGAGAATCTGTCTATGATCTTCTCCCAAAGGAGTTACGGTTACCTCCATCTAGAG
AAACATCTGTAGCATCAATGAGTCAGACAAGTGGTGGTGAGGCAGGCTCGCCTCCTCCAG
CTGTAGTTGCTGTAGATGCTTCTTCAGCTCCCTCCTCTTCCTCCATGGGCGGTGCTTGCA
GCTCCTTTACCACCTCTTCCAGCCCTACCATTTATTCTACCTCAGTCACCGACAGCAAGG
CTATGCAAGTGGAGAGCTGCTCCTCAGCCTTGGGGGTAAGTAACCGAGGGGTAAGTGAAA
AGCAGTTAACCAGTAACACAGTTCAGCAGCATCCATCAACCCCGAAGAGGCACACAGTCT
TGTACATCTCACCACCACCTGAGGACTTGCTGGATAACAGTCGGATGTCCTGCCAGGATG
AGGGGTGTGGATTGGAATCTGAGCAGAGCTGCAGTATGTGGATGGAGGATTCCCCCTCCA
ACTTCAGTAACATGAGCACCAGTTCCTACAATGATAACACTGAGGTACCTCGTAAATCAC
GAAAACGAAATCCAAAGCAGAGGCCGGGGGTCAAACGACGAGATTGTGAAGAATCTAACA
TGGATATATTTGATGCCGACAGTGCCAAAGCACCTCACTATGTGCTTTCTCAGCTTACCA
CGGACAACAAAGGCAACTCAAAAGCAGGAAATGGATATATCTTATAAATGATTTGAGGTT
ACCCAGGGAAAGTATAATAACATTTGTCAAGACAAAAATCTCTCATGAAATAATTCATGG
AACAGAAACTCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61828717|ref|XP_606558.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61828717|ref|XP_606558.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               490-1054, gnl|bosTau2|chr18 (30272893-30273457)
               

               
               490-1054, gnl|Hg17|chr16 (68238426-68238990)
               

               
               490-1054, gnl|Mm7|chr8 (105938946-105939510)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               490-1054, gnl|bosTau2|chr18 (30272893-30273457)
               

               
               490-1054, gnl|Hg17|chr16 (68238426-68238990)
               

               
               490-1054, gnl|Mm7|chr8 (105938946-105939510)

	490-1054, gnl\|bosTau2\|chr18 (30272893-30273457)
	490-1054, gnl\|Hg17\|chr16 (68238426-68238990)
	490-1054, gnl\|Mm7\|chr8 (105938946-105939510)