Non-Coding RNA Search

Ss1.1-Blo1-PBL010026B03.5

Sequence:


               
               ATTCTCTGCGTGTTCTTTTATTTTCCATAGAACCCGGACACCAGCCAGCCTGCAACCTGA
AACCAACAACAGGTGACAGACCCCCAAATAATAGACAAAAAAGAAAGTGAGAGAGAGGAA
GAAAAAATAAGAGAAAGCAAATAACCAAGAAAGAAAGAGATGGAAGGAAGGAAGGAAAGG
AGGAAAGAAGAAAAGTCTTCTCTCCCTGGAGCAGGGACCAGGAAAAGAGAACCATAGCAA
GGACTTAAGTGTGGAGACTCACACCCAGTGGCAACAATAGACCCAACCCGCTCACAGCAG
CAGCAGGAATTGAAAATGAGTTTCCGAGTTCTCTCCCATCCCACAGTCACAGACAGCATC
AGACTGATCTGCCCATAGCAGTGGCAACAGCAAAATGCAGGAGGGCCAACCAATCCCCAT
GCCCAACCCCACCCCCAGCAGCAGTGCACTCAGTCTGCCTACATCAGTGGAACCAGAAAC
CAGGTACCAAGCTCATCCACTGCCCCACAGCAGGTGACAGCAGGCAGGCTGCTCCACCTG
CACCAGTAGTGCCAGTAGGCTCCAGCCCTCCATGTAGTGACAGAACATGACCCAGGGCAT
CTCCCTACATCTGCCTAATGATACCCAGCAGCCCAGGGAAGCACCTTTGCCTATGTAAGC
ATCACATGTAGGGATCTAGTGGGAGCTCAAGCAGAGCCAGAAGAACAGGACTACACTTGC
AGGGGCTCAGAACTAACTGCCTTGAAATGATAGCCTACAAAATAAGCTTGGAGTTCCTGC
TGTAGCAGAGTGGGTTAATGATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCTCTGCGTGTTCTTTTATTTTCCATAGAACCCGGACACCAGCCAGCCTGCAACCTGA
AACCAACAACAGGTGACAGACCCCCAAATAATAGACAAAAAAGAAAGTGAGAGAGAGGAA
GAAAAAATAAGAGAAAGCAAATAACCAAGAAAGAAAGAGATGGAAGGAAGGAAGGAAAGG
AGGAAAGAAGAAAAGTCTTCTCTCCCTGGAGCAGGGACCAGGAAAAGAGAACCATAGCAA
GGACTTAAGTGTGGAGACTCACACCCAGTGGCAACAATAGACCCAACCCGCTCACAGCAG
CAGCAGGAATTGAAAATGAGTTTCCGAGTTCTCTCCCATCCCACAGTCACAGACAGCATC
AGACTGATCTGCCCATAGCAGTGGCAACAGCAAAATGCAGGAGGGCCAACCAATCCCCAT
GCCCAACCCCACCCCCAGCAGCAGTGCACTCAGTCTGCCTACATCAGTGGAACCAGAAAC
CAGGTACCAAGCTCATCCACTGCCCCACAGCAGGTGACAGCAGGCAGGCTGCTCCACCTG
CACCAGTAGTGCCAGTAGGCTCCAGCCCTCCATGTAGTGACAGAACATGACCCAGGGCAT
CTCCCTACATCTGCCTAATGATACCCAGCAGCCCAGGGAAGCACCTTTGCCTATGTAAGC
ATCACATGTAGGGATCTAGTGGGAGCTCAAGCAGAGCCAGAAGAACAGGACTACACTTGC
AGGGGCTCAGAACTAACTGCCTTGAAATGATAGCCTACAAAATAAGCTTGGAGTTCCTGC
TGTAGCAGAGTGGGTTAATGATCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               446-671, - strand, RNAz p=0.999857

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               446-671, - strand, RNAz p=0.999857

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-762, gnl|bosTau2|chr13 (33045630-33044876)
               

               
               3-762, gnl|Hg17|chr20 (5800279-5801082)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-762, gnl|bosTau2|chr13 (33045630-33044876)
               

               
               3-762, gnl|Hg17|chr20 (5800279-5801082)

	3-762, gnl\|bosTau2\|chr13 (33045630-33044876)
	3-762, gnl\|Hg17\|chr20 (5800279-5801082)