Non-Coding RNA Search

Ss1.1-Blo1-PBL010030A12.5

Sequence:


               
               ATTACTGTGTGCTGCTAATCAAACTACTTCAGAGCATGTTTTCACAGAATTCAGGCATCA
GAAGCCCCTGCAATGCTTGATAAAATGCGGGTTCTAGGGTCGTGTGTCACACCTGAAAAA
TCCACATGTCTAGCATACGACCTAAATATCTTCATTTTCAGTAACATTATGAGATCTGCA
GGAGGCCAGTTATCTTTGTCTTTTATTCATGAATATAACCCAAATACCTGGATCACTTCC
TCAAAAGCATCTAAAATATTATGAGGGTCTGTAAATATGTATTGAATGAATGAGCAAATG
AATCAAAGCCTGGTAGGATTGCTCTTCTGTTAAATAATAGCAGAAACCAGTTCCAGGAGA
GAGGCGTCTTCAGCGGCAGGAAGACAGACCAGAAAAGAGGAAGGAGAGAAGTCAGTTCGA
AGAATGGGGCAACTTCTGGGAGGCTAGGCTTAGGTGGGGCACAAAAATGGAGACTTTGTG
TGTCTGGAACATTTGATGGAACTTGACAGAGGAGAAAAGAGGCTTGAGAAGGGGAAATGC
AGTGAGACAGTGATGAGCACAACGTGCTTCAACTTTAACAGGCTCCCCAGGCACCCGGAG
GGCTTGTTGCACCTCTGGCTGCTGCTTCTCTCCACCCTGAGTTTCTGATTCAGTAGCTCC
AGGGTGGGGCGTGAGGATTTGCATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCCACCCT
GCTTCACGTGGAGCATGGAGCTCCTGGGCCAGGGATGGATCAAGTTGGAGCAGCAGTCTC
ATCTAATCCACACAGCAACGCAGGCAGGATCCCCAACCCACTGTGCCATGCCTGGTATTG
AACCCTCGTCCCAGCACCCCAAGACACCTCCAATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTACTGTGTGCTGCTAATCAAACTACTTCAGAGCATGTTTTCACAGAATTCAGGCATCA
GAAGCCCCTGCAATGCTTGATAAAATGCGGGTTCTAGGGTCGTGTGTCACACCTGAAAAA
TCCACATGTCTAGCATACGACCTAAATATCTTCATTTTCAGTAACATTATGAGATCTGCA
GGAGGCCAGTTATCTTTGTCTTTTATTCATGAATATAACCCAAATACCTGGATCACTTCC
TCAAAAGCATCTAAAATATTATGAGGGTCTGTAAATATGTATTGAATGAATGAGCAAATG
AATCAAAGCCTGGTAGGATTGCTCTTCTGTTAAATAATAGCAGAAACCAGTTCCAGGAGA
GAGGCGTCTTCAGCGGCAGGAAGACAGACCAGAAAAGAGGAAGGAGAGAAGTCAGTTCGA
AGAATGGGGCAACTTCTGGGAGGCTAGGCTTAGGTGGGGCACAAAAATGGAGACTTTGTG
TGTCTGGAACATTTGATGGAACTTGACAGAGGAGAAAAGAGGCTTGAGAAGGGGAAATGC
AGTGAGACAGTGATGAGCACAACGTGCTTCAACTTTAACAGGCTCCCCAGGCACCCGGAG
GGCTTGTTGCACCTCTGGCTGCTGCTTCTCTCCACCCTGAGTTTCTGATTCAGTAGCTCC
AGGGTGGGGCGTGAGGATTTGCATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCCACCCT
GCTTCACGTGGAGCATGGAGCTCCTGGGCCAGGGATGGATCAAGTTGGAGCAGCAGTCTC
ATCTAATCCACACAGCAACGCAGGCAGGATCCCCAACCCACTGTGCCATGCCTGGTATTG
AACCCTCGTCCCAGCACCCCAAGACACCTCCAATCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               314-426, + strand, RNAz p=0.716422

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               314-426, + strand, RNAz p=0.716422

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               314-552, gnl|bosTau2|chr11 (27964574-27964342)
               

               
               314-552, gnl|Hg17|chr11 (95686470-95686227)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               314-552, gnl|bosTau2|chr11 (27964574-27964342)
               

               
               314-552, gnl|Hg17|chr11 (95686470-95686227)

	314-552, gnl\|bosTau2\|chr11 (27964574-27964342)
	314-552, gnl\|Hg17\|chr11 (95686470-95686227)