Non-Coding RNA Search

Ss1.1-Blo1-PBL010031A07.5

Sequence:


               
               CTTCCACTGGGGCGGCCACCTTGGGGGTCCCCCTCCCCATCACCCCCAGCAGCAGCCATT
TATTTCATGTGCCTTCTATTCCATACACCCCACAACACTTCCTACCTCCTTCCTATCCTT
TGAGACTCTTTCCTCTTCACCTGGTGGATGTGATAACGATGGGTTCTCCATTTCAGGGGC
CCTGCACACTTCCAGCAGTGAACTGTCTTCCAGAGCTGCAGGGGTGGGGCTTTCAGGTTT
ACTCTGCTCACACATAAAACAAGGATGTGGGAGGAAGCATTCACACTTCGTAATCATCTG
TCTTCCCAGACATACTGGTACTGAACCTCTGACAGCTGTCTTCCATCTGACACAGTTCTA
TTGCAGATGTTTTAAAATAAAGGCCAGGAGTTCCCTTCATGGCTCAGCGGTTAATGAACC
TGACTAGGATGCGGAGGTTGTGGGTTCGATTCCAGGCCTTCCTCAGTGGGTCAAGACTCC
GGCATTGCTGTGAACTGTGGTGTAGGTCACAGATACGGCTCAGATCCTACATGGCTGTGG
CTGTGGTGTAGGCCAGCAGCTGTAGCTCTGATTGGACCCCTAGATATGTCACAGGTGTGG
CCCTAGAAAGCAAAAAAGTAAATGAAATAAAGACCATCCCCTGGAGCCATTTTGTTTGGT
GGGTTCCTAGGATGTATTAAATTTGAAACACTGTCTTTGTTGAAAACCTGTGAGATGTCA
CCTATAAATCCAGATTTCAGGCATCTCTTGAAGAATCAGAAGATCTGGCAACCCTGGGCC
AGCGTTTCTCCTTGCTCATCTCTGCATAGAGTTGAGTAGTGACTGCCTTTCTTGGACAGG
ATAAAGCATTCAGGGCAGTCTCCACCGTTTCCCACAAAGGTCAGGGAGTTTGTGGTCATA
GATCCTCCTTTACCTTGCCTACTTCTCTGTTTTGCCTTATCTTCCTGGCTCTTGAAGGCA
TTTGTGTTTGTAATCCTGCTTTAAAGATTACAGACTGCGCTTGCTTTGTACAGTATAGGA
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------AAAGAAAAAGAAACTTTAAATGTC
AAAACATGAAAAACTCTCTTACTACCAGTTATAAATAAGAAAATGGAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCACTGGGGCGGCCACCTTGGGGGTCCCCCTCCCCATCACCCCCAGCAGCAGCCATT
TATTTCATGTGCCTTCTATTCCATACACCCCACAACACTTCCTACCTCCTTCCTATCCTT
TGAGACTCTTTCCTCTTCACCTGGTGGATGTGATAACGATGGGTTCTCCATTTCAGGGGC
CCTGCACACTTCCAGCAGTGAACTGTCTTCCAGAGCTGCAGGGGTGGGGCTTTCAGGTTT
ACTCTGCTCACACATAAAACAAGGATGTGGGAGGAAGCATTCACACTTCGTAATCATCTG
TCTTCCCAGACATACTGGTACTGAACCTCTGACAGCTGTCTTCCATCTGACACAGTTCTA
TTGCAGATGTTTTAAAATAAAGGCCAGGAGTTCCCTTCATGGCTCAGCGGTTAATGAACC
TGACTAGGATGCGGAGGTTGTGGGTTCGATTCCAGGCCTTCCTCAGTGGGTCAAGACTCC
GGCATTGCTGTGAACTGTGGTGTAGGTCACAGATACGGCTCAGATCCTACATGGCTGTGG
CTGTGGTGTAGGCCAGCAGCTGTAGCTCTGATTGGACCCCTAGATATGTCACAGGTGTGG
CCCTAGAAAGCAAAAAAGTAAATGAAATAAAGACCATCCCCTGGAGCCATTTTGTTTGGT
GGGTTCCTAGGATGTATTAAATTTGAAACACTGTCTTTGTTGAAAACCTGTGAGATGTCA
CCTATAAATCCAGATTTCAGGCATCTCTTGAAGAATCAGAAGATCTGGCAACCCTGGGCC
AGCGTTTCTCCTTGCTCATCTCTGCATAGAGTTGAGTAGTGACTGCCTTTCTTGGACAGG
ATAAAGCATTCAGGGCAGTCTCCACCGTTTCCCACAAAGGTCAGGGAGTTTGTGGTCATA
GATCCTCCTTTACCTTGCCTACTTCTCTGTTTTGCCTTATCTTCCTGGCTCTTGAAGGCA
TTTGTGTTTGTAATCCTGCTTTAAAGATTACAGACTGCGCTTGCTTTGTACAGTATAGGA
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------AAAGAAAAAGAAACTTTAAATGTC
AAAACATGAAAAACTCTCTTACTACCAGTTATAAATAAGAAAATGGAAAAAAAAAAAAAA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               53-384, gnl|bosTau2|chr23 (30701664-30701990)
               

               
               53-384, gnl|Mm7|chr13 (23917477-23917815)
               


               
               625-1008, gnl|bosTau2|chr23 (30701981-30702343)
               

               
               625-1008, gnl|Mm7|chr13 (23917806-23918288)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-384, gnl|bosTau2|chr23 (30701664-30701990)
               

               
               53-384, gnl|Mm7|chr13 (23917477-23917815)
               


               
               625-1008, gnl|bosTau2|chr23 (30701981-30702343)
               

               
               625-1008, gnl|Mm7|chr13 (23917806-23918288)

	53-384, gnl\|bosTau2\|chr23 (30701664-30701990)
	53-384, gnl\|Mm7\|chr13 (23917477-23917815)

	625-1008, gnl\|bosTau2\|chr23 (30701981-30702343)
	625-1008, gnl\|Mm7\|chr13 (23917806-23918288)