Ss1.1-Blo1-PBL010031B10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCAAGATGGCGGCAGAAGGAGCTGGTGGGAAATACAGAAGCACAGTCAGCAAAAGCAAA GACCCCTCGGGGCTGCTCATCTCTGTGATCAGGACCCTCTCGACCAGTGATGACGTTGAA GACCGAGAAAACGAGAAGGGGCGCCTGGAAGAGGCCTACGAGAAGTGTGACCGAGACCTG GATGAACTGATCGTGCAGCACTACACAGAACTGACGACAGCCATTCGCACGTACCAGAGC ATCACAGAGCGCATCACCAACTCCCGGAACAAGATAAAGCAGGTGAAGGAGAATCTGCTT TCATGTAAGATGCTGTTGCACTGCAAACGAGACGAACTGCGGAAGTTGTGGATTGAAGGG ATTGAACATAAGCATGTCCTGAACCTGCTGGATGAAATCGAGAATATCAAGCAAGTGCCT CAAAAGCTGGAACAGTGCATGGCGAGCAAGCACTACCTCAGTGCCACCGACATGCTGGTG TCAGCAGTCGAGTCTTTGGAGGGCCCCTTGCTCCAGGTGGAAGGCCTGAGCGACCTCAGG TTGGAGCTTCACAGCAAGAAGATGAACCTTCACTTGGTTCTCATAGATGAACTGCACCGG CACCTTTATATCAAGTCCACGAGCCGAGTTGTGCAGCAGAACAAGGAAAAGGGGAGGATG AGCTCCCTTGTGAAAGATGCTTCTCCTGTTCCTCTACTTGATGTTACAAACCTTCCTACT CCTCGAAAATTCCTCGACACCTCTCAGTATTCTACTCCGGGAAGCTCAAGTGTGAAGGAG ATAAGCCTCCAGGACATCAAGGAAGATTTGGAATTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCAAGATGGCGGCAGAAGGAGCTGGTGGGAAATACAGAAGCACAGTCAGCAAAAGCAAA GACCCCTCGGGGCTGCTCATCTCTGTGATCAGGACCCTCTCGACCAGTGATGACGTTGAA GACCGAGAAAACGAGAAGGGGCGCCTGGAAGAGGCCTACGAGAAGTGTGACCGAGACCTG GATGAACTGATCGTGCAGCACTACACAGAACTGACGACAGCCATTCGCACGTACCAGAGC ATCACAGAGCGCATCACCAACTCCCGGAACAAGATAAAGCAGGTGAAGGAGAATCTGCTT TCATGTAAGATGCTGTTGCACTGCAAACGAGACGAACTGCGGAAGTTGTGGATTGAAGGG ATTGAACATAAGCATGTCCTGAACCTGCTGGATGAAATCGAGAATATCAAGCAAGTGCCT CAAAAGCTGGAACAGTGCATGGCGAGCAAGCACTACCTCAGTGCCACCGACATGCTGGTG TCAGCAGTCGAGTCTTTGGAGGGCCCCTTGCTCCAGGTGGAAGGCCTGAGCGACCTCAGG TTGGAGCTTCACAGCAAGAAGATGAACCTTCACTTGGTTCTCATAGATGAACTGCACCGG CACCTTTATATCAAGTCCACGAGCCGAGTTGTGCAGCAGAACAAGGAAAAGGGGAGGATG AGCTCCCTTGTGAAAGATGCTTCTCCTGTTCCTCTACTTGATGTTACAAACCTTCCTACT CCTCGAAAATTCCTCGACACCTCTCAGTATTCTACTCCGGGAAGCTCAAGTGTGAAGGAG ATAAGCCTCCAGGACATCAAGGAAGATTTGGAATTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 368-486, - strand, RNAz p=0.859658 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 368-486, - strand, RNAz p=0.859658 |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 280-486, gnl|bosTau2|chr8 (16433742-16433948) | |
| 280-486, gnl|canFam2|chr14 (6994710-6994495) | |
| 280-486, gnl|danRer3|chr4 (16439898-16439697) | |
| 280-486, gnl|dasNov1|scaffold_103214 (4377-4162) | |
| 280-486, gnl|echTel1|scaffold_170793 (2536-2752) | |
| 280-486, gnl|fr1|chrUn (210911822-210911620) | |
| 280-486, gnl|galGal2|chr14 (15690485-15690276) | |
| 280-486, gnl|hg17|chr7 (132430916-132431131) | |
| 280-486, gnl|Hg17|chr7 (132430928-132431134) | |
| 280-486, gnl|loxAfr1|scaffold_23612 (2493-2279) | |
| 280-486, gnl|mm7|chr6 (33208360-33208575) | |
| 280-486, gnl|Mm7|chr6 (33208372-33208575) | |
| 280-486, gnl|monDom2|scaffold_22 (10526418-10526203) | |
| 280-486, gnl|oryCun1|scaffold_208682 (67751-67536) | |
| 280-486, gnl|panTro1|chr6 (135052520-135052735) | |
| 280-486, gnl|rheMac2|chr3 (170693840-170694055) | |
| 280-486, gnl|rn3|chr4 (60712835-60713050) | |
| 280-486, gnl|tetNig1|chrUn_random (130280389-130280594) | |
| 280-486, gnl|xenTro1|scaffold_20 (1867795-1868010) | |
| 661-792, gnl|bosTau2|chr8 (16466213-16466344) | |
| 661-792, gnl|canFam2|chr14 (6965516-6965417) | |
| 661-792, gnl|dasNov1|scaffold_165630 (664-762) | |
| 661-792, gnl|galGal2|chr14 (15670671-15670570) | |
| 661-792, gnl|hg17|chr7 (132459278-132459374) | |
| 661-792, gnl|Hg17|chr7 (132459291-132459419) | |
| 661-792, gnl|loxAfr1|scaffold_28704 (7427-7526) | |
| 661-792, gnl|mm7|chr6 (33236459-33236557) | |
| 661-792, gnl|Mm7|chr6 (33236471-33236598) | |
| 661-792, gnl|monDom2|scaffold_22 (10466280-10466181) | |
| 661-792, gnl|oryCun1|scaffold_203379 (33936-33837) | |
| 661-792, gnl|panTro1|chr6 (135081089-135081185) | |
| 661-792, gnl|rn3|chr4 (60741363-60741461) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 280-486, gnl|bosTau2|chr8 (16433742-16433948) | |
| 280-486, gnl|canFam2|chr14 (6994710-6994495) | |
| 280-486, gnl|danRer3|chr4 (16439898-16439697) | |
| 280-486, gnl|dasNov1|scaffold_103214 (4377-4162) | |
| 280-486, gnl|echTel1|scaffold_170793 (2536-2752) | |
| 280-486, gnl|fr1|chrUn (210911822-210911620) | |
| 280-486, gnl|galGal2|chr14 (15690485-15690276) | |
| 280-486, gnl|hg17|chr7 (132430916-132431131) | |
| 280-486, gnl|Hg17|chr7 (132430928-132431134) | |
| 280-486, gnl|loxAfr1|scaffold_23612 (2493-2279) | |
| 280-486, gnl|mm7|chr6 (33208360-33208575) | |
| 280-486, gnl|Mm7|chr6 (33208372-33208575) | |
| 280-486, gnl|monDom2|scaffold_22 (10526418-10526203) | |
| 280-486, gnl|oryCun1|scaffold_208682 (67751-67536) | |
| 280-486, gnl|panTro1|chr6 (135052520-135052735) | |
| 280-486, gnl|rheMac2|chr3 (170693840-170694055) | |
| 280-486, gnl|rn3|chr4 (60712835-60713050) | |
| 280-486, gnl|tetNig1|chrUn_random (130280389-130280594) | |
| 280-486, gnl|xenTro1|scaffold_20 (1867795-1868010) | |
| 661-792, gnl|bosTau2|chr8 (16466213-16466344) | |
| 661-792, gnl|canFam2|chr14 (6965516-6965417) | |
| 661-792, gnl|dasNov1|scaffold_165630 (664-762) | |
| 661-792, gnl|galGal2|chr14 (15670671-15670570) | |
| 661-792, gnl|hg17|chr7 (132459278-132459374) | |
| 661-792, gnl|Hg17|chr7 (132459291-132459419) | |
| 661-792, gnl|loxAfr1|scaffold_28704 (7427-7526) | |
| 661-792, gnl|mm7|chr6 (33236459-33236557) | |
| 661-792, gnl|Mm7|chr6 (33236471-33236598) | |
| 661-792, gnl|monDom2|scaffold_22 (10466280-10466181) | |
| 661-792, gnl|oryCun1|scaffold_203379 (33936-33837) | |
| 661-792, gnl|panTro1|chr6 (135081089-135081185) | |
| 661-792, gnl|rn3|chr4 (60741363-60741461) |