Ss1.1-Blo2-AR040D02PBC30GD02S.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTACTCTGGGTTCCAGAACTTATTTCCCCCTGGCCGTGAGAGGGGGCGGTGAGGTGGA ACCTTGGCAATGGATAGGAGGTTTGGGGGGAAAAATTCAAGAGGGTTGGGGGTTATTGTG AAGTATTTAGAAGTAAAAGTACTAGAAACTTTGCATACAGGGAGGCACTTATGATTTCTG TGTTTGTTAAGTTGGTGACTGCTTGTATGATGTTACTTAAATTGGTCCTCTTGAATTCCA GAATTTGAAAGTGGTCTGTAGGGAAAATCTGAGTTTAAAGAATTGGACTTTAAACACTGC CTGATCGGATTAAAGCAGTTTAGTGATAATGGTGCCACTTAGTGTAGATGTGACTTTAAT ATGCATCCTGTGAATAGTGTCTCTCTGATTTATATCTCAGCCTAAATGGGAATATCTTAC ATTTGTGTTTAAGGTGATTTTGCAAAACAGGGGGGAAATTAGGCATGTTTAAAAACTTAA AATTACCCTTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTACTCTGGGTTCCAGAACTTATTTCCCCCTGGCCGTGAGAGGGGGCGGTGAGGTGGA ACCTTGGCAATGGATAGGAGGTTTGGGGGGAAAAATTCAAGAGGGTTGGGGGTTATTGTG AAGTATTTAGAAGTAAAAGTACTAGAAACTTTGCATACAGGGAGGCACTTATGATTTCTG TGTTTGTTAAGTTGGTGACTGCTTGTATGATGTTACTTAAATTGGTCCTCTTGAATTCCA GAATTTGAAAGTGGTCTGTAGGGAAAATCTGAGTTTAAAGAATTGGACTTTAAACACTGC CTGATCGGATTAAAGCAGTTTAGTGATAATGGTGCCACTTAGTGTAGATGTGACTTTAAT ATGCATCCTGTGAATAGTGTCTCTCTGATTTATATCTCAGCCTAAATGGGAATATCTTAC ATTTGTGTTTAAGGTGATTTTGCAAAACAGGGGGGAAATTAGGCATGTTTAAAAACTTAA AATTACCCTTAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-113, + strand, RNAz p=0.920078 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-113, + strand, RNAz p=0.920078 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-113, gnl|bosTau2|chr11 (50339350-50339462) | |
| 1-113, gnl|canFam2|chr17 (25899075-25899525) | |
| 1-113, gnl|echTel1|scaffold_244904 (4336-4774) | |
| 1-113, gnl|hg17|chr2 (29064237-29064685) | |
| 1-113, gnl|Hg17|chr2 (29064593-29064704) | |
| 1-113, gnl|loxAfr1|scaffold_31871 (17139-17590) | |
| 1-113, gnl|mm7|chr17 (69924217-69924628) | |
| 1-113, gnl|Mm7|chr17 (69924540-69924647) | |
| 1-113, gnl|monDom2|scaffold_1 (146696538-146696155) | |
| 1-113, gnl|oryCun1|scaffold_183828 (7928-7494) | |
| 1-113, gnl|panTro1|chr12 (30023544-30023992) | |
| 1-113, gnl|rheMac2|chr13 (28926430-28926878) | |
| 1-113, gnl|rn3|chr6 (23967907-23967484) | |
| 159-321, gnl|bosTau2|chr11 (50339470-50339630) | |
| 159-321, gnl|canFam2|chr17 (25899526-25899840) | |
| 159-321, gnl|echTel1|scaffold_244904 (4775-5080) | |
| 159-321, gnl|hg17|chr2 (29064686-29065004) | |
| 159-321, gnl|Hg17|chr2 (29064752-29064908) | |
| 159-321, gnl|loxAfr1|scaffold_31871 (17591-17919) | |
| 159-321, gnl|mm7|chr17 (69924629-69924902) | |
| 159-321, gnl|Mm7|chr17 (69924674-69924815) | |
| 159-321, gnl|oryCun1|scaffold_183828 (7493-7195) | |
| 159-321, gnl|panTro1|chr12 (30023993-30024311) | |
| 159-321, gnl|rheMac2|chr13 (28926879-28927198) | |
| 159-321, gnl|rn3|chr6 (23967483-23967226) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-113, gnl|bosTau2|chr11 (50339350-50339462) | |
| 1-113, gnl|canFam2|chr17 (25899075-25899525) | |
| 1-113, gnl|echTel1|scaffold_244904 (4336-4774) | |
| 1-113, gnl|hg17|chr2 (29064237-29064685) | |
| 1-113, gnl|Hg17|chr2 (29064593-29064704) | |
| 1-113, gnl|loxAfr1|scaffold_31871 (17139-17590) | |
| 1-113, gnl|mm7|chr17 (69924217-69924628) | |
| 1-113, gnl|Mm7|chr17 (69924540-69924647) | |
| 1-113, gnl|monDom2|scaffold_1 (146696538-146696155) | |
| 1-113, gnl|oryCun1|scaffold_183828 (7928-7494) | |
| 1-113, gnl|panTro1|chr12 (30023544-30023992) | |
| 1-113, gnl|rheMac2|chr13 (28926430-28926878) | |
| 1-113, gnl|rn3|chr6 (23967907-23967484) | |
| 159-321, gnl|bosTau2|chr11 (50339470-50339630) | |
| 159-321, gnl|canFam2|chr17 (25899526-25899840) | |
| 159-321, gnl|echTel1|scaffold_244904 (4775-5080) | |
| 159-321, gnl|hg17|chr2 (29064686-29065004) | |
| 159-321, gnl|Hg17|chr2 (29064752-29064908) | |
| 159-321, gnl|loxAfr1|scaffold_31871 (17591-17919) | |
| 159-321, gnl|mm7|chr17 (69924629-69924902) | |
| 159-321, gnl|Mm7|chr17 (69924674-69924815) | |
| 159-321, gnl|oryCun1|scaffold_183828 (7493-7195) | |
| 159-321, gnl|panTro1|chr12 (30023993-30024311) | |
| 159-321, gnl|rheMac2|chr13 (28926879-28927198) | |
| 159-321, gnl|rn3|chr6 (23967483-23967226) |