Ss1.1-Bra1-PBL_17_D02.5
|
GGTCCGGAATCCCGGGTCGACCCACGCGTCCGCCCAGACAAGACCAGAAAGGGGGCTTTC
GAAGCTCCTTCCGCAAGGCTCTTTAAAAAGAAGGGCTTGTTTGGCTGGTGGCCCCACACA
CCCAGAATGCTGCTTCGGGATGAAGCTAGGCATGGAGCCAGATGCAACAGAAAACCTGAG
AAAGGGTTCTCTTCCCTCTGAGGCTGGGAGGGCCGAATGCTCATACCCACAAGGATTCAA
AAGGCAGAGTCAAGTTGACATCATAAAAAAAAATTCTGAAAAATGTCCAAGATATTTGGG
GAAAAAGATGACGCTCTGATTGTTTCTATCTCAGGCACATGTATCCTGGGTAGCTACCAG
GTCACATGTCCCTGAGAGCTGCCCAGAATTGGTCAGAATAAAGACTACATCTTAAAGTTG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGTCCGGAATCCCGGGTCGACCCACGCGTCCGCCCAGACAAGACCAGAAAGGGGGCTTTC
GAAGCTCCTTCCGCAAGGCTCTTTAAAAAGAAGGGCTTGTTTGGCTGGTGGCCCCACACA
CCCAGAATGCTGCTTCGGGATGAAGCTAGGCATGGAGCCAGATGCAACAGAAAACCTGAG
AAAGGGTTCTCTTCCCTCTGAGGCTGGGAGGGCCGAATGCTCATACCCACAAGGATTCAA
AAGGCAGAGTCAAGTTGACATCATAAAAAAAAATTCTGAAAAATGTCCAAGATATTTGGG
GAAAAAGATGACGCTCTGATTGTTTCTATCTCAGGCACATGTATCCTGGGTAGCTACCAG
GTCACATGTCCCTGAGAGCTGCCCAGAATTGGTCAGAATAAAGACTACATCTTAAAGTTG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
93-420, gnl|bosTau2|chr11 (15807890-15807560) |
|
93-420, gnl|canFam2|chr17 (34097230-34098037) |
|
93-420, gnl|dasNov1|scaffold_4348 (80536-79743) |
|
93-420, gnl|echTel1|scaffold_213239 (4153-4942) |
|
93-420, gnl|hg17|chr2 (39108191-39108999) |
|
93-420, gnl|Hg17|chr2 (39108197-39108525) |
|
93-420, gnl|loxAfr1|scaffold_11207 (44788-45579) |
|
93-420, gnl|mm7|chr17 (78679926-78680751) |
|
93-420, gnl|Mm7|chr17 (78679932-78680238) |
|
93-420, gnl|oryCun1|scaffold_182344 (17703-16921) |
|
93-420, gnl|panTro1|chr12 (40603574-40604378) |
|
93-420, gnl|rheMac2|chr13 (38956917-38957727) |
|
93-420, gnl|rn3|chr6 (3296696-3297459) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
93-420, gnl|bosTau2|chr11 (15807890-15807560) |
|
93-420, gnl|canFam2|chr17 (34097230-34098037) |
|
93-420, gnl|dasNov1|scaffold_4348 (80536-79743) |
|
93-420, gnl|echTel1|scaffold_213239 (4153-4942) |
|
93-420, gnl|hg17|chr2 (39108191-39108999) |
|
93-420, gnl|Hg17|chr2 (39108197-39108525) |
|
93-420, gnl|loxAfr1|scaffold_11207 (44788-45579) |
|
93-420, gnl|mm7|chr17 (78679926-78680751) |
|
93-420, gnl|Mm7|chr17 (78679932-78680238) |
|
93-420, gnl|oryCun1|scaffold_182344 (17703-16921) |
|
93-420, gnl|panTro1|chr12 (40603574-40604378) |
|
93-420, gnl|rheMac2|chr13 (38956917-38957727) |
|
93-420, gnl|rn3|chr6 (3296696-3297459) |
