Ss1.1-Emb1-C0005179_E19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCTCTCGCCGCCTGAGGAAGATGAGGCTGAAGATCGGGCTCCTCTTACGCAGTTTGCT GGTGGTGGGCAGCTTCCTGGGGCTGGTAGTTCTCTGGTCCTCTCTGTCCCCGCGGCCGGA CGAGCCGAGCCCGTTGAGCAGGATGAGGGAAGACAGAGCTGTTAATAATGCCATGCCTGA CCGAGGGGCCAATGGACTAGCTCCCGGGGATGACAGATTCAAACCCGTGGTGCCCTGGCC TCATGTTGAAGGAGTGGAAGTGGACTTAGAGTCTATTAGAAGAAAAAACAAGGCCAGACA TGAACAAGAGCGCCACGCTGGAGGAGATAACCAGAAAGACATAATGCAGAGGCAGTATCT CACATTTAAGCCTCAGACTTTCAGCTACCGTGATCCTGTGCTCCGCCCAGGGGTCCTCGG GAACTTTGAACCCAAAGAGCCTGAGCCTCATGGAGTGGTTGGTGGCCCTGGAGAGAAAGC CAAGCCAGTGGTTTTGGGACCAGAACTCAAACATGCAGTTCAAGCCAGCATTAAAGAGTT TGGATTTAACATGGTGGCAAGTGACATGATCTCTCTGGACCGCAGCGTCAATGACTTACG GCAAGAAGAATGCAAGTATTGGCATTACGATGAAAACCTGCTCACGGCCAGCATCGTCAT TGTCTTCCATAATGAGGGGTGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAG GACTCCAAGGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCTCTCGCCGCCTGAGGAAGATGAGGCTGAAGATCGGGCTCCTCTTACGCAGTTTGCT GGTGGTGGGCAGCTTCCTGGGGCTGGTAGTTCTCTGGTCCTCTCTGTCCCCGCGGCCGGA CGAGCCGAGCCCGTTGAGCAGGATGAGGGAAGACAGAGCTGTTAATAATGCCATGCCTGA CCGAGGGGCCAATGGACTAGCTCCCGGGGATGACAGATTCAAACCCGTGGTGCCCTGGCC TCATGTTGAAGGAGTGGAAGTGGACTTAGAGTCTATTAGAAGAAAAAACAAGGCCAGACA TGAACAAGAGCGCCACGCTGGAGGAGATAACCAGAAAGACATAATGCAGAGGCAGTATCT CACATTTAAGCCTCAGACTTTCAGCTACCGTGATCCTGTGCTCCGCCCAGGGGTCCTCGG GAACTTTGAACCCAAAGAGCCTGAGCCTCATGGAGTGGTTGGTGGCCCTGGAGAGAAAGC CAAGCCAGTGGTTTTGGGACCAGAACTCAAACATGCAGTTCAAGCCAGCATTAAAGAGTT TGGATTTAACATGGTGGCAAGTGACATGATCTCTCTGGACCGCAGCGTCAATGACTTACG GCAAGAAGAATGCAAGTATTGGCATTACGATGAAAACCTGCTCACGGCCAGCATCGTCAT TGTCTTCCATAATGAGGGGTGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAG GACTCCAAGGAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 227-346, + strand, RNAz p=0.566577 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 227-346, + strand, RNAz p=0.566577 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 148-609, gnl|bosTau2|chr8 (3113612-3114073) | |
| 148-609, gnl|Hg17|chr4 (174543860-174544321) | |
| 148-609, gnl|Mm7|chr8 (55967009-55966548) | |
| 610-732, gnl|bosTau2|chr8 (3153570-3153692) | |
| 610-732, gnl|canFam2|chr25 (26884093-26884283) | |
| 610-732, gnl|danRer3|chrNA (203535311-203535498) | |
| 610-732, gnl|dasNov1|scaffold_27694 (361-173) | |
| 610-732, gnl|echTel1|scaffold_319973 (38719-38529) | |
| 610-732, gnl|fr1|chrUn (17419583-17419772) | |
| 610-732, gnl|galGal2|chr4 (43879602-43879787) | |
| 610-732, gnl|hg17|chr4 (174587975-174588165) | |
| 610-732, gnl|Hg17|chr4 (174587989-174588111) | |
| 610-732, gnl|loxAfr1|scaffold_1776 (59340-59155) | |
| 610-732, gnl|mm7|chr8 (55935407-55935217) | |
| 610-732, gnl|Mm7|chr8 (55935391-55935269) | |
| 610-732, gnl|monDom2|scaffold_9 (51148804-51148991) | |
| 610-732, gnl|oryCun1|scaffold_211683 (54566-54381) | |
| 610-732, gnl|panTro1|chr3 (192535534-192535724) | |
| 610-732, gnl|rheMac2|chr5 (165345402-165345592) | |
| 610-732, gnl|rn3|chr16 (36094182-36094372) | |
| 610-732, gnl|tetNig1|chrUn_random (88491962-88491777) | |
| 610-732, gnl|xenTro1|scaffold_25 (1474833-1474651) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 148-609, gnl|bosTau2|chr8 (3113612-3114073) | |
| 148-609, gnl|Hg17|chr4 (174543860-174544321) | |
| 148-609, gnl|Mm7|chr8 (55967009-55966548) | |
| 610-732, gnl|bosTau2|chr8 (3153570-3153692) | |
| 610-732, gnl|canFam2|chr25 (26884093-26884283) | |
| 610-732, gnl|danRer3|chrNA (203535311-203535498) | |
| 610-732, gnl|dasNov1|scaffold_27694 (361-173) | |
| 610-732, gnl|echTel1|scaffold_319973 (38719-38529) | |
| 610-732, gnl|fr1|chrUn (17419583-17419772) | |
| 610-732, gnl|galGal2|chr4 (43879602-43879787) | |
| 610-732, gnl|hg17|chr4 (174587975-174588165) | |
| 610-732, gnl|Hg17|chr4 (174587989-174588111) | |
| 610-732, gnl|loxAfr1|scaffold_1776 (59340-59155) | |
| 610-732, gnl|mm7|chr8 (55935407-55935217) | |
| 610-732, gnl|Mm7|chr8 (55935391-55935269) | |
| 610-732, gnl|monDom2|scaffold_9 (51148804-51148991) | |
| 610-732, gnl|oryCun1|scaffold_211683 (54566-54381) | |
| 610-732, gnl|panTro1|chr3 (192535534-192535724) | |
| 610-732, gnl|rheMac2|chr5 (165345402-165345592) | |
| 610-732, gnl|rn3|chr16 (36094182-36094372) | |
| 610-732, gnl|tetNig1|chrUn_random (88491962-88491777) | |
| 610-732, gnl|xenTro1|scaffold_25 (1474833-1474651) |