Ss1.1-Emb1-C0005185_J24.5
|
TTCAATTCTAAAGCAAGAGGAGAGAAAGGGCAGTCATTCAATGACAAGCGTAAAAAGAAC
CTCTTTTCCCGAAAATTCCCCTTCTACAAGAACAAGGACCAGAGTGAGCAGGAAACAAGT
GATGCTGACCAACATGTAACTTCTAATGCCAGTGATAGCGAAAGTAGTTACCGTGGTCAA
GAAGAATATGTCTTATCTTATGAACCAGTGAATCAGCAAGAAGTTAATTATACTCGACCA
ATATTTTACAATCTTATAGAAAAATATACTTCTTAATTTGGAAAATAGATGTAATTCAAT
TCATACTTTAAAAGTTACATTAATTTTACTATTTTTTTACCATTTGTATATATATAGAAA
TTTGCTGTATGATTTTATGAAATATGGCTTAGCCCATAGATTATGAGGATCTAGTCATTT
TATATTGACTATATTATATTGTTTTATTTCCTAAGCAGCTTCTTTCCACTGTTTGTAGTA
GTATCACTATGATTCTAGTGACCCTTGTTCAAAATCTTGGAAGCATCTTTGATCTTTCTG
TGTTCCTCATTTCCCTTGTCCAATTTGTTTCTAGGCCCTATTTGTTCTTATCAATCTTTC
TTATTTATGACCTTCTTTTCATCCTCCTACCACAATGTTAATTCTGATTTTCACAAATAT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCAATTCTAAAGCAAGAGGAGAGAAAGGGCAGTCATTCAATGACAAGCGTAAAAAGAAC
CTCTTTTCCCGAAAATTCCCCTTCTACAAGAACAAGGACCAGAGTGAGCAGGAAACAAGT
GATGCTGACCAACATGTAACTTCTAATGCCAGTGATAGCGAAAGTAGTTACCGTGGTCAA
GAAGAATATGTCTTATCTTATGAACCAGTGAATCAGCAAGAAGTTAATTATACTCGACCA
ATATTTTACAATCTTATAGAAAAATATACTTCTTAATTTGGAAAATAGATGTAATTCAAT
TCATACTTTAAAAGTTACATTAATTTTACTATTTTTTTACCATTTGTATATATATAGAAA
TTTGCTGTATGATTTTATGAAATATGGCTTAGCCCATAGATTATGAGGATCTAGTCATTT
TATATTGACTATATTATATTGTTTTATTTCCTAAGCAGCTTCTTTCCACTGTTTGTAGTA
GTATCACTATGATTCTAGTGACCCTTGTTCAAAATCTTGGAAGCATCTTTGATCTTTCTG
TGTTCCTCATTTCCCTTGTCCAATTTGTTTCTAGGCCCTATTTGTTCTTATCAATCTTTC
TTATTTATGACCTTCTTTTCATCCTCCTACCACAATGTTAATTCTGATTTTCACAAATAT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
30-130, gnl|bosTau2|chr1 (45083754-45083854) |
|
30-130, gnl|canFam2|chr33 (33085214-33085347) |
|
30-130, gnl|danRer3|chr2 (649536-649687) |
|
30-130, gnl|dasNov1|scaffold_50896 (6352-6219) |
|
30-130, gnl|echTel1|scaffold_288335 (1499-1366) |
|
30-130, gnl|fr1|chrUn (139052955-139052821) |
|
30-130, gnl|galGal2|chr9 (11904612-11904745) |
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30-130, gnl|hg17|chr3 (198291761-198291894) |
|
30-130, gnl|Hg17|chr3 (198291867-198291767) |
|
30-130, gnl|loxAfr1|scaffold_65165 (2761-2628) |
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30-130, gnl|mm7|chr16 (31521466-31521333) |
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30-130, gnl|Mm7|chr16 (31521358-31521458) |
|
30-130, gnl|monDom2|scaffold_248 (114925-115056) |
|
30-130, gnl|oryCun1|scaffold_88699 (137-4) |
|
30-130, gnl|panTro1|chr2 (202481647-202481780) |
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30-130, gnl|rheMac2|chr2 (188348131-188347998) |
|
30-130, gnl|rn3|chr11 (70819165-70819298) |
|
30-130, gnl|tetNig1|chr7 (1178837-1178969) |
|
30-130, gnl|xenTro1|scaffold_344 (706536-706402) |
| |
|
173-654, gnl|bosTau2|chr1 (45094215-45094712) |
|
173-654, gnl|Hg17|chr3 (198281935-198281459) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
30-130, gnl|bosTau2|chr1 (45083754-45083854) |
|
30-130, gnl|canFam2|chr33 (33085214-33085347) |
|
30-130, gnl|danRer3|chr2 (649536-649687) |
|
30-130, gnl|dasNov1|scaffold_50896 (6352-6219) |
|
30-130, gnl|echTel1|scaffold_288335 (1499-1366) |
|
30-130, gnl|fr1|chrUn (139052955-139052821) |
|
30-130, gnl|galGal2|chr9 (11904612-11904745) |
|
30-130, gnl|hg17|chr3 (198291761-198291894) |
|
30-130, gnl|Hg17|chr3 (198291867-198291767) |
|
30-130, gnl|loxAfr1|scaffold_65165 (2761-2628) |
|
30-130, gnl|mm7|chr16 (31521466-31521333) |
|
30-130, gnl|Mm7|chr16 (31521358-31521458) |
|
30-130, gnl|monDom2|scaffold_248 (114925-115056) |
|
30-130, gnl|oryCun1|scaffold_88699 (137-4) |
|
30-130, gnl|panTro1|chr2 (202481647-202481780) |
|
30-130, gnl|rheMac2|chr2 (188348131-188347998) |
|
30-130, gnl|rn3|chr11 (70819165-70819298) |
|
30-130, gnl|tetNig1|chr7 (1178837-1178969) |
|
30-130, gnl|xenTro1|scaffold_344 (706536-706402) |
| |
|
173-654, gnl|bosTau2|chr1 (45094215-45094712) |
|
173-654, gnl|Hg17|chr3 (198281935-198281459) |
