Non-Coding RNA Search

Ss1.1-Emb1-C0005196_B14.5

Sequence:


               
               TACAAAGATGATTAAACAGACTTTCACTTACATGCAATTTTGCAACTATGGAAATACAGT
TCTGATGGATACCAAAGCCTTAGCGGGGGAGCTAAAGTATATCCAGGCTGTTTTCCTCAC
AAAATGGAGCACTGAATCAATCCTTTTTATGTTTGGTTTAATGTACATAAAAGAAAGGCA
CTTTTTAAAAAGTACTTTTTAAGATGAGGGAAAAAAAAACACTTGGAGGTTTTTAGTTTG
CTTTTACTGTCCTCCCCTTTTTTCTTTCATTTTTTTGACCAAACTTGTTTACCTTTATGT
AATTTGATATTCCAAACAACAGGAAATTATTTATTTCCATTTTGATTGATTTTAGTTTCC
TCTGTGCCAATTTTGGATATACTGTTTTCACTTAGAACTACAGGACATGTCAAAGTGGGC
TTAACTAGTTCACTATAACTTTTTGATAAACTGTAATCTCTGTTTAAAAGAACATGCAGG
GACTCTGAACAGGGCAAGAACAGGAAAATGGCTCATATTGCGGTTCCCGTGTCTCGGGAC
GCTGACTGACGCCTTGAGGAGCCCAAAGTTATACTGATAAAGAAATTTAATATTTTTATA
GGCGATGATGAGATTTATTCAAATCACTATTCCCTATCTAATTTAGAATAAAGTGGTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACAAAGATGATTAAACAGACTTTCACTTACATGCAATTTTGCAACTATGGAAATACAGT
TCTGATGGATACCAAAGCCTTAGCGGGGGAGCTAAAGTATATCCAGGCTGTTTTCCTCAC
AAAATGGAGCACTGAATCAATCCTTTTTATGTTTGGTTTAATGTACATAAAAGAAAGGCA
CTTTTTAAAAAGTACTTTTTAAGATGAGGGAAAAAAAAACACTTGGAGGTTTTTAGTTTG
CTTTTACTGTCCTCCCCTTTTTTCTTTCATTTTTTTGACCAAACTTGTTTACCTTTATGT
AATTTGATATTCCAAACAACAGGAAATTATTTATTTCCATTTTGATTGATTTTAGTTTCC
TCTGTGCCAATTTTGGATATACTGTTTTCACTTAGAACTACAGGACATGTCAAAGTGGGC
TTAACTAGTTCACTATAACTTTTTGATAAACTGTAATCTCTGTTTAAAAGAACATGCAGG
GACTCTGAACAGGGCAAGAACAGGAAAATGGCTCATATTGCGGTTCCCGTGTCTCGGGAC
GCTGACTGACGCCTTGAGGAGCCCAAAGTTATACTGATAAAGAAATTTAATATTTTTATA
GGCGATGATGAGATTTATTCAAATCACTATTCCCTATCTAATTTAGAATAAAGTGGTAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               161-275, + strand, RNAz p=0.944526

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               161-275, + strand, RNAz p=0.944526

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-659, gnl|bosTau2|chr1 (61770318-61769666)
               

               
               1-659, gnl|Hg17|chr3 (172197139-172196518)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-659, gnl|bosTau2|chr1 (61770318-61769666)
               

               
               1-659, gnl|Hg17|chr3 (172197139-172196518)

	1-659, gnl\|bosTau2\|chr1 (61770318-61769666)
	1-659, gnl\|Hg17\|chr3 (172197139-172196518)