Non-Coding RNA Search

Ss1.1-Emb1-C0005211_H23.5

Sequence:


               
               TAAGATGGGGAAGGAAAGAGTTATTAGCATTCTTGAGTTTCTTCACTGGGTCAAGCACTG
TGTTGGGCACCCCCTGTGCCAACCCATCTCTCCTCCATAACACCCTGGTAAGGCTGGGAT
GTTCCCTTTCACAGAAGAGGAAACTTAGAGGAGGCTTAGAGAAGTTTTCTAATAATACCC
AATCAGGAATCTACTGAACTCGGCCTCCAGGGACTATGTCCTTTCCACTGAATTATACAT
AGCTACCCTGGAGATGTTTACTAGGAAAACAGGACTTAGGAGAAATGTGATATCTGTCCT
CTGATGTTTCAGAAACTGGTGTGGGTTGGGGTTAGACTTGATCCTGGATGGCTGGATAGG
ACAAAAATAGAAGCAGGAGGGTATTGGCTCCAAGGAAGCAGATTTCAGCTCTGTGTGATG
AAAATCTGACCCATGGCTGGACTGTCTGCCTTTGAATAATAGCTGTAACTCTGACACTGG
ACTTCCTCTACTGGGAGTGTTCAAAGACAAAAGCTGAATTAGTACCTGTCAAGAACACTG
CCAGAAAAAATTAAATCCCTCCAGTAGATAAATTTGCTTAGGCAATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAGATGGGGAAGGAAAGAGTTATTAGCATTCTTGAGTTTCTTCACTGGGTCAAGCACTG
TGTTGGGCACCCCCTGTGCCAACCCATCTCTCCTCCATAACACCCTGGTAAGGCTGGGAT
GTTCCCTTTCACAGAAGAGGAAACTTAGAGGAGGCTTAGAGAAGTTTTCTAATAATACCC
AATCAGGAATCTACTGAACTCGGCCTCCAGGGACTATGTCCTTTCCACTGAATTATACAT
AGCTACCCTGGAGATGTTTACTAGGAAAACAGGACTTAGGAGAAATGTGATATCTGTCCT
CTGATGTTTCAGAAACTGGTGTGGGTTGGGGTTAGACTTGATCCTGGATGGCTGGATAGG
ACAAAAATAGAAGCAGGAGGGTATTGGCTCCAAGGAAGCAGATTTCAGCTCTGTGTGATG
AAAATCTGACCCATGGCTGGACTGTCTGCCTTTGAATAATAGCTGTAACTCTGACACTGG
ACTTCCTCTACTGGGAGTGTTCAAAGACAAAAGCTGAATTAGTACCTGTCAAGAACACTG
CCAGAAAAAATTAAATCCCTCCAGTAGATAAATTTGCTTAGGCAATCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               160-278, - strand, RNAz p=0.710246

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-278, - strand, RNAz p=0.710246

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-587, gnl|bosTau2|chr27 (30693170-30692597)
               

               
               1-587, gnl|Hg17|chr3 (23517866-23518397)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-587, gnl|bosTau2|chr27 (30693170-30692597)
               

               
               1-587, gnl|Hg17|chr3 (23517866-23518397)

	1-587, gnl\|bosTau2\|chr27 (30693170-30692597)
	1-587, gnl\|Hg17\|chr3 (23517866-23518397)