Non-Coding RNA Search

Ss1.1-End1-UMC-pd3end3-009-a02.3

Sequence:


               
               TGGGGGTAGTTTTTCTAGCCTTGAAACTTATTTATGTTGCCTTGGTAGGTCATTTGCTGT
TACTTGGAAATTTAGTGTATTCATCTGTAAAATAACTTTTCTAGTACTAGAGATGCCATT
GAATTTCAAAAAAAATGCAGTCTTTCTAAATCTCATTCCTTTGGTATACCGATTTGATAC
CTCTGGTACATTAATTTAGTAAGACTTAAATTTATAGTTTGATAAAATATAATAGCTAGG
AGTTCCTGCTGTGGCAAAACAGGATTGGTGGCACCTCTGCAGCACTGGGACACAGGTTTG
ATCCCCAGCCCAGCACAGTGGGTTAAAGATCCTGCGTTGTAGATCACAGCTCATGTTCGA
TCCCTGACCTAGGAACTCCATATGCCATGGTACAGCCCCAAATTAACAAAAGTAATATTA
ACTAGTTGCGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGGGTAGTTTTTCTAGCCTTGAAACTTATTTATGTTGCCTTGGTAGGTCATTTGCTGT
TACTTGGAAATTTAGTGTATTCATCTGTAAAATAACTTTTCTAGTACTAGAGATGCCATT
GAATTTCAAAAAAAATGCAGTCTTTCTAAATCTCATTCCTTTGGTATACCGATTTGATAC
CTCTGGTACATTAATTTAGTAAGACTTAAATTTATAGTTTGATAAAATATAATAGCTAGG
AGTTCCTGCTGTGGCAAAACAGGATTGGTGGCACCTCTGCAGCACTGGGACACAGGTTTG
ATCCCCAGCCCAGCACAGTGGGTTAAAGATCCTGCGTTGTAGATCACAGCTCATGTTCGA
TCCCTGACCTAGGAACTCCATATGCCATGGTACAGCCCCAAATTAACAAAAGTAATATTA
ACTAGTTGCGGC

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               1-179, gnl|bosTau2|chr9 (59527040-59526862)
               

               
               1-179, gnl|canFam2|chr23 (32711124-32711265)
               

               
               1-179, gnl|dasNov1|scaffold_1672 (31276-31407)
               

               
               1-179, gnl|echTel1|scaffold_312325 (41272-41425)
               

               
               1-179, gnl|hg17|chr3 (133879381-133879534)
               

               
               1-179, gnl|Hg17|chr3 (133879415-133879604)
               

               
               1-179, gnl|loxAfr1|scaffold_34679 (11911-11759)
               

               
               1-179, gnl|mm7|chr9 (103761763-103761620)
               

               
               1-179, gnl|panTro1|chr2 (136018476-136018629)
               

               
               1-179, gnl|rheMac2|chr2 (155014303-155014151)
               

               
               1-179, gnl|rn3|chr8 (109128158-109128010)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-179, gnl|bosTau2|chr9 (59527040-59526862)
               

               
               1-179, gnl|canFam2|chr23 (32711124-32711265)
               

               
               1-179, gnl|dasNov1|scaffold_1672 (31276-31407)
               

               
               1-179, gnl|echTel1|scaffold_312325 (41272-41425)
               

               
               1-179, gnl|hg17|chr3 (133879381-133879534)
               

               
               1-179, gnl|Hg17|chr3 (133879415-133879604)
               

               
               1-179, gnl|loxAfr1|scaffold_34679 (11911-11759)
               

               
               1-179, gnl|mm7|chr9 (103761763-103761620)
               

               
               1-179, gnl|panTro1|chr2 (136018476-136018629)
               

               
               1-179, gnl|rheMac2|chr2 (155014303-155014151)
               

               
               1-179, gnl|rn3|chr8 (109128158-109128010)

	1-179, gnl\|bosTau2\|chr9 (59527040-59526862)
	1-179, gnl\|canFam2\|chr23 (32711124-32711265)
	1-179, gnl\|dasNov1\|scaffold_1672 (31276-31407)
	1-179, gnl\|echTel1\|scaffold_312325 (41272-41425)
	1-179, gnl\|hg17\|chr3 (133879381-133879534)
	1-179, gnl\|Hg17\|chr3 (133879415-133879604)
	1-179, gnl\|loxAfr1\|scaffold_34679 (11911-11759)
	1-179, gnl\|mm7\|chr9 (103761763-103761620)
	1-179, gnl\|panTro1\|chr2 (136018476-136018629)
	1-179, gnl\|rheMac2\|chr2 (155014303-155014151)
	1-179, gnl\|rn3\|chr8 (109128158-109128010)