Non-Coding RNA Search

Ss1.1-End3-UMC-pd6end2-005-e04.3

Sequence:


               
               ACCAATTTAAACGACGGCCTCTGCATATAAGTGGAAGAAACTGGAAAGGACAAGATACTT
GAGTACTCCTCATTATATCCCAAGGTTGCTGTGGGGAGGCTTCTGGGACTGAGCTAATCC
TTCACCTTGATACTCCAAACATAGTCTTCAAGTGCACCTTGCCAGTAACTCTGAGCAACT
TAAGATTTGAATTTCATCAGCCAAACTCCAGGACAGCCTCTTGAGTTAATGTTTGTTTTT
GTAGGCTGGCAGATTACCACTTTGGGGATCTGGTTATCCTCCCCCGCTCCCCTTTTTTAA
CCCCTTTAAGAGATACTTACATTGAATTGTGAAAGGAATTAAATCTTTTTATGCCTTTTT
AAAATTCCCTTTTGGTTGCCTGTTACTAATCTATACAGCTACAGAATATTTCAACACATG
GCACTTGCCATCTGTTCCTCTTCCCCACTGGCCTTGGTAAGTTGATCTCTCAGCTCATTC
CTTAGCTTTTAAATTCAACTAATTCACCTGGTATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAATTTAAACGACGGCCTCTGCATATAAGTGGAAGAAACTGGAAAGGACAAGATACTT
GAGTACTCCTCATTATATCCCAAGGTTGCTGTGGGGAGGCTTCTGGGACTGAGCTAATCC
TTCACCTTGATACTCCAAACATAGTCTTCAAGTGCACCTTGCCAGTAACTCTGAGCAACT
TAAGATTTGAATTTCATCAGCCAAACTCCAGGACAGCCTCTTGAGTTAATGTTTGTTTTT
GTAGGCTGGCAGATTACCACTTTGGGGATCTGGTTATCCTCCCCCGCTCCCCTTTTTTAA
CCCCTTTAAGAGATACTTACATTGAATTGTGAAAGGAATTAAATCTTTTTATGCCTTTTT
AAAATTCCCTTTTGGTTGCCTGTTACTAATCTATACAGCTACAGAATATTTCAACACATG
GCACTTGCCATCTGTTCCTCTTCCCCACTGGCCTTGGTAAGTTGATCTCTCAGCTCATTC
CTTAGCTTTTAAATTCAACTAATTCACCTGGTATAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               326-509, - strand, RNAz p=0.999763

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               326-509, - strand, RNAz p=0.999763

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-513, gnl|bosTau2|chr10 (53647313-53647839)
               

               
               3-513, gnl|Hg17|chr14 (67190089-67190939)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-513, gnl|bosTau2|chr10 (53647313-53647839)
               

               
               3-513, gnl|Hg17|chr14 (67190089-67190939)

	3-513, gnl\|bosTau2\|chr10 (53647313-53647839)
	3-513, gnl\|Hg17\|chr14 (67190089-67190939)