Ss1.1-Liv1-LVR010005A09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCCTGGCCCGGCCCCAGCTGTGGGACCGACGCTTCCGGTGAGCGACAGAGGCAGCTCCC AAGGGCCTGGAGACCCGTGGGGCGGGCTCTGGGATCTGAGCACCCCGCCGTGGCCTGGAG TCCCCGTCTGTACCTATTCCCCATTCCCCCTGCCCTGCCGAGCTGGGCAGTTAGCCAGCC TACTGAAACTCTCGGAACCATGTTTGCAGACTTGGATTATGACATCGAAGAGGATAAACT CGGAATCCCTACTGTGCCTGGGAAGGTGACCTTGCAGAAGGATGCTCAGAACCTGATTGG GATCAGCATTGGAGGAGGAGCCCAGTACTGTCCCTGCCTGTATATAGTCCAGGTGTTTGA CAACACCCCGGCCGCGCTGGACGGCACCGTGGCAGCCGGCGATGAGATCACTGGGGTCAA TGGCAGGTCCATCAAAGGAAAAACGAAGGTGGAGGTGGCCAAGATGATTCAGGAGGTGAA GGGGGAGGTGACCATCCACTACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCT GGACATCGTGTTGAAGAAGGTGAAGCATCGGCTGGTGGAGAACATGAGTTCGGGGACCGC CGATGCCCTGGGCCTGAGCCGGGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTCGA GGAGCTGGAACGGACGGCAGAGCTGTATAAAGGGATGACGGAACACACCAAGAACCTCCT ACGGGCCTTCTATGAGCTGTCACAGACGCACCGGGCCTTTGGGGACGTATTCTCCGTGAT CGGGGTGCGGGAGCCCCAGCCAGCTGCGAGTGAGGCTTTTGTGAAGTTCGCCGACGCCCA CCGCAGCATTGAGAAGTTTGGCATCCGGCTGCTGAAAACCATCAAGCCGATGCTGACGGA CCTGAACACGTACCTCAACAAAGCCATCCCGGACACGCGCCTCACCATCAAGAAGTACCT GGACGTGAAGTTTGAATACCTGTCGTACTGCCTGAAGGTGAAGGAGATGGATGACGAGGA ATACAGCTGCATCGCCCTAGGGGAGCCCCTGTACCGCGTGAGCACAGGCAACTACGAGTA CCGGCTGATCCTGCGCTGCCGCCAGGAGGCCCGCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCCTGGCCCGGCCCCAGCTGTGGGACCGACGCTTCCGGTGAGCGACAGAGGCAGCTCCC AAGGGCCTGGAGACCCGTGGGGCGGGCTCTGGGATCTGAGCACCCCGCCGTGGCCTGGAG TCCCCGTCTGTACCTATTCCCCATTCCCCCTGCCCTGCCGAGCTGGGCAGTTAGCCAGCC TACTGAAACTCTCGGAACCATGTTTGCAGACTTGGATTATGACATCGAAGAGGATAAACT CGGAATCCCTACTGTGCCTGGGAAGGTGACCTTGCAGAAGGATGCTCAGAACCTGATTGG GATCAGCATTGGAGGAGGAGCCCAGTACTGTCCCTGCCTGTATATAGTCCAGGTGTTTGA CAACACCCCGGCCGCGCTGGACGGCACCGTGGCAGCCGGCGATGAGATCACTGGGGTCAA TGGCAGGTCCATCAAAGGAAAAACGAAGGTGGAGGTGGCCAAGATGATTCAGGAGGTGAA GGGGGAGGTGACCATCCACTACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCT GGACATCGTGTTGAAGAAGGTGAAGCATCGGCTGGTGGAGAACATGAGTTCGGGGACCGC CGATGCCCTGGGCCTGAGCCGGGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTCGA GGAGCTGGAACGGACGGCAGAGCTGTATAAAGGGATGACGGAACACACCAAGAACCTCCT ACGGGCCTTCTATGAGCTGTCACAGACGCACCGGGCCTTTGGGGACGTATTCTCCGTGAT CGGGGTGCGGGAGCCCCAGCCAGCTGCGAGTGAGGCTTTTGTGAAGTTCGCCGACGCCCA CCGCAGCATTGAGAAGTTTGGCATCCGGCTGCTGAAAACCATCAAGCCGATGCTGACGGA CCTGAACACGTACCTCAACAAAGCCATCCCGGACACGCGCCTCACCATCAAGAAGTACCT GGACGTGAAGTTTGAATACCTGTCGTACTGCCTGAAGGTGAAGGAGATGGATGACGAGGA ATACAGCTGCATCGCCCTAGGGGAGCCCCTGTACCGCGTGAGCACAGGCAACTACGAGTA CCGGCTGATCCTGCGCTGCCGCCAGGAGGCCCGCGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 67 entry(ies) | More info |
| Aligned organism(s): 67 entry(ies) | Help | Less info |
| 1-136, gnl|bosTau2|chr5 (66939862-66939727) | |
| 1-136, gnl|canFam2|chr10 (29686301-29686178) | |
| 1-136, gnl|dasNov1|scaffold_148402 (1703-1596) | |
| 1-136, gnl|galGal2|chr1 (47733524-47733398) | |
| 1-136, gnl|hg17|chr22 (36777930-36778053) | |
| 1-136, gnl|Hg17|chr22 (36777959-36778094) | |
| 1-136, gnl|loxAfr1|scaffold_59694 (39787-39919) | |
| 1-136, gnl|mm7|chr15 (79312359-79312481) | |
| 1-136, gnl|Mm7|chr15 (79312388-79312522) | |
| 1-136, gnl|monDom2|scaffold_370 (33039-32922) | |
| 1-136, gnl|panTro1|chr23_random (11138668-11138545) | |
| 1-136, gnl|rheMac2|chr10 (81993063-81993186) | |
| 1-136, gnl|rn3|chr7 (117247191-117247313) | |
| 350-482, gnl|bosTau2|chr5 (66933763-66933631) | |
| 350-482, gnl|canFam2|chr10 (29679048-29678899) | |
| 350-482, gnl|danRer3|chr3 (1143082-1142948) | |
| 350-482, gnl|echTel1|scaffold_210788 (3708-3860) | |
| 350-482, gnl|fr1|chrUn (246325354-246325201) | |
| 350-482, gnl|galGal2|chr1 (47731011-47730868) | |
| 350-482, gnl|hg17|chr22 (36785502-36785652) | |
| 350-482, gnl|Hg17|chr22 (36785506-36785638) | |
| 350-482, gnl|loxAfr1|scaffold_84968 (1485-1627) | |
| 350-482, gnl|mm7|chr15 (79322529-79322678) | |
| 350-482, gnl|Mm7|chr15 (79322533-79322665) | |
| 350-482, gnl|monDom2|scaffold_370 (24505-24363) | |
| 350-482, gnl|oryCun1|scaffold_190787 (14964-14815) | |
| 350-482, gnl|panTro1|chr23_random (11131024-11130874) | |
| 350-482, gnl|rheMac2|chr10 (82000264-82000414) | |
| 350-482, gnl|rn3|chr7 (117257553-117257702) | |
| 350-482, gnl|tetNig1|chrUn_random (87939485-87939632) | |
| 350-482, gnl|xenTro1|scaffold_1092 (252013-252157) | |
| 538-641, gnl|bosTau2|chr5 (66930308-66930205) | |
| 538-641, gnl|canFam2|chr10 (29675731-29675598) | |
| 538-641, gnl|danRer3|chr3 (1136631-1136533) | |
| 538-641, gnl|echTel1|scaffold_318991 (49217-49342) | |
| 538-641, gnl|fr1|chrUn (246324437-246324333) | |
| 538-641, gnl|galGal2|chr1 (47729431-47729321) | |
| 538-641, gnl|hg17|chr22 (36789522-36789653) | |
| 538-641, gnl|Hg17|chr22 (36789531-36789632) | |
| 538-641, gnl|loxAfr1|scaffold_84968 (4967-5101) | |
| 538-641, gnl|mm7|chr15 (79325904-79326029) | |
| 538-641, gnl|Mm7|chr15 (79325914-79326012) | |
| 538-641, gnl|monDom2|scaffold_370 (20353-20232) | |
| 538-641, gnl|oryCun1|scaffold_190787 (12151-12027) | |
| 538-641, gnl|panTro1|chr23_random (11127007-11126876) | |
| 538-641, gnl|rheMac2|chr10 (82004999-82005130) | |
| 538-641, gnl|rn3|chr7 (117260561-117260687) | |
| 538-641, gnl|tetNig1|chrUn_random (87940481-87940580) | |
| 538-641, gnl|xenTro1|scaffold_1092 (253312-253414) | |
| 755-889, gnl|bosTau2|chr5 (66926654-66926520) | |
| 755-889, gnl|canFam2|chr10 (29671988-29671835) | |
| 755-889, gnl|danRer3|chr3 (1132549-1132403) | |
| 755-889, gnl|echTel1|scaffold_318991 (52874-53027) | |
| 755-889, gnl|fr1|chrUn (246323982-246323829) | |
| 755-889, gnl|galGal2|chr1 (47728347-47728201) | |
| 755-889, gnl|hg17|chr22 (36792970-36793123) | |
| 755-889, gnl|Hg17|chr22 (36792983-36793117) | |
| 755-889, gnl|loxAfr1|scaffold_84968 (8969-9122) | |
| 755-889, gnl|mm7|chr15 (79328916-79329069) | |
| 755-889, gnl|Mm7|chr15 (79328929-79329063) | |
| 755-889, gnl|monDom2|scaffold_370 (14580-14427) | |
| 755-889, gnl|oryCun1|scaffold_190787 (7972-7819) | |
| 755-889, gnl|panTro1|chr23 (36972083-36972236) | |
| 755-889, gnl|rheMac2|chr10 (82008441-82008594) | |
| 755-889, gnl|rn3|chr7 (117263407-117263560) | |
| 755-889, gnl|tetNig1|chrUn_random (87940992-87941137) | |
| 755-889, gnl|xenTro1|scaffold_1092 (256577-256725) |
| Aligned organism(s): 67 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-136, gnl|bosTau2|chr5 (66939862-66939727) | |
| 1-136, gnl|canFam2|chr10 (29686301-29686178) | |
| 1-136, gnl|dasNov1|scaffold_148402 (1703-1596) | |
| 1-136, gnl|galGal2|chr1 (47733524-47733398) | |
| 1-136, gnl|hg17|chr22 (36777930-36778053) | |
| 1-136, gnl|Hg17|chr22 (36777959-36778094) | |
| 1-136, gnl|loxAfr1|scaffold_59694 (39787-39919) | |
| 1-136, gnl|mm7|chr15 (79312359-79312481) | |
| 1-136, gnl|Mm7|chr15 (79312388-79312522) | |
| 1-136, gnl|monDom2|scaffold_370 (33039-32922) | |
| 1-136, gnl|panTro1|chr23_random (11138668-11138545) | |
| 1-136, gnl|rheMac2|chr10 (81993063-81993186) | |
| 1-136, gnl|rn3|chr7 (117247191-117247313) | |
| 350-482, gnl|bosTau2|chr5 (66933763-66933631) | |
| 350-482, gnl|canFam2|chr10 (29679048-29678899) | |
| 350-482, gnl|danRer3|chr3 (1143082-1142948) | |
| 350-482, gnl|echTel1|scaffold_210788 (3708-3860) | |
| 350-482, gnl|fr1|chrUn (246325354-246325201) | |
| 350-482, gnl|galGal2|chr1 (47731011-47730868) | |
| 350-482, gnl|hg17|chr22 (36785502-36785652) | |
| 350-482, gnl|Hg17|chr22 (36785506-36785638) | |
| 350-482, gnl|loxAfr1|scaffold_84968 (1485-1627) | |
| 350-482, gnl|mm7|chr15 (79322529-79322678) | |
| 350-482, gnl|Mm7|chr15 (79322533-79322665) | |
| 350-482, gnl|monDom2|scaffold_370 (24505-24363) | |
| 350-482, gnl|oryCun1|scaffold_190787 (14964-14815) | |
| 350-482, gnl|panTro1|chr23_random (11131024-11130874) | |
| 350-482, gnl|rheMac2|chr10 (82000264-82000414) | |
| 350-482, gnl|rn3|chr7 (117257553-117257702) | |
| 350-482, gnl|tetNig1|chrUn_random (87939485-87939632) | |
| 350-482, gnl|xenTro1|scaffold_1092 (252013-252157) | |
| 538-641, gnl|bosTau2|chr5 (66930308-66930205) | |
| 538-641, gnl|canFam2|chr10 (29675731-29675598) | |
| 538-641, gnl|danRer3|chr3 (1136631-1136533) | |
| 538-641, gnl|echTel1|scaffold_318991 (49217-49342) | |
| 538-641, gnl|fr1|chrUn (246324437-246324333) | |
| 538-641, gnl|galGal2|chr1 (47729431-47729321) | |
| 538-641, gnl|hg17|chr22 (36789522-36789653) | |
| 538-641, gnl|Hg17|chr22 (36789531-36789632) | |
| 538-641, gnl|loxAfr1|scaffold_84968 (4967-5101) | |
| 538-641, gnl|mm7|chr15 (79325904-79326029) | |
| 538-641, gnl|Mm7|chr15 (79325914-79326012) | |
| 538-641, gnl|monDom2|scaffold_370 (20353-20232) | |
| 538-641, gnl|oryCun1|scaffold_190787 (12151-12027) | |
| 538-641, gnl|panTro1|chr23_random (11127007-11126876) | |
| 538-641, gnl|rheMac2|chr10 (82004999-82005130) | |
| 538-641, gnl|rn3|chr7 (117260561-117260687) | |
| 538-641, gnl|tetNig1|chrUn_random (87940481-87940580) | |
| 538-641, gnl|xenTro1|scaffold_1092 (253312-253414) | |
| 755-889, gnl|bosTau2|chr5 (66926654-66926520) | |
| 755-889, gnl|canFam2|chr10 (29671988-29671835) | |
| 755-889, gnl|danRer3|chr3 (1132549-1132403) | |
| 755-889, gnl|echTel1|scaffold_318991 (52874-53027) | |
| 755-889, gnl|fr1|chrUn (246323982-246323829) | |
| 755-889, gnl|galGal2|chr1 (47728347-47728201) | |
| 755-889, gnl|hg17|chr22 (36792970-36793123) | |
| 755-889, gnl|Hg17|chr22 (36792983-36793117) | |
| 755-889, gnl|loxAfr1|scaffold_84968 (8969-9122) | |
| 755-889, gnl|mm7|chr15 (79328916-79329069) | |
| 755-889, gnl|Mm7|chr15 (79328929-79329063) | |
| 755-889, gnl|monDom2|scaffold_370 (14580-14427) | |
| 755-889, gnl|oryCun1|scaffold_190787 (7972-7819) | |
| 755-889, gnl|panTro1|chr23 (36972083-36972236) | |
| 755-889, gnl|rheMac2|chr10 (82008441-82008594) | |
| 755-889, gnl|rn3|chr7 (117263407-117263560) | |
| 755-889, gnl|tetNig1|chrUn_random (87940992-87941137) | |
| 755-889, gnl|xenTro1|scaffold_1092 (256577-256725) |