Ss1.1-Liv1-LVR010009C11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTGTGAATAGCTCCATCCAGCCTGGGAAGCGAGCTGGACAGCTGAGCCGGGCTGCGCCC AGAGTGCCCAACAGGCCCATGCTGAGGCTGGAGGCCTCCCCCCGGCTGGGGGGCCACCAG CTTGGCCTCCTGCCCATGCTCCTGGCTCTCCTTGGCATGACCTGGGCAGAAGTGCAGCCA CTTCAGCTGCAGGAGAAGCAGGTTCCAATGCCTGGAGCCCTGAGCAGGAAGGAGAGCTTC TTGCTCCTCTCGCTGCACAACCGCCTGCGCAGCCGGGTCCACCCCCCTGCAGCCAACATG CAGAGAATGGACTGGAGTGAGAGGCTGGCTCAACAGGCTCAGACTAGGGCGGCCCTTTGT GGCGCCCCAGCCCCAAGCCTGGCTTCCATCCTCCGGGCCGCACCCCAAGTGGGCTGGAAT GTGCAGCTGCTGCCCAGAGGCTCGGCATCCTTCATCCACGTGGTGAGCCTGTGGTTCTCA GAGGGGCAGCGGTACAGCCACGCAGCGGCCGAGTGTGCCCCCAACGCCACCTGCACCCAC TACACTCAGCTCGTGTGGGCCACCTCAAGCCAGCTGGGCTGTGGGCGGCACCCCTGCTCT GGGGCCCAGGGCGAGATGGAAGCCTTTGTCTGCGCCTACTCTCCCGGGGGCAACTGGGAG GCCAACGGGAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTGTGAATAGCTCCATCCAGCCTGGGAAGCGAGCTGGACAGCTGAGCCGGGCTGCGCCC AGAGTGCCCAACAGGCCCATGCTGAGGCTGGAGGCCTCCCCCCGGCTGGGGGGCCACCAG CTTGGCCTCCTGCCCATGCTCCTGGCTCTCCTTGGCATGACCTGGGCAGAAGTGCAGCCA CTTCAGCTGCAGGAGAAGCAGGTTCCAATGCCTGGAGCCCTGAGCAGGAAGGAGAGCTTC TTGCTCCTCTCGCTGCACAACCGCCTGCGCAGCCGGGTCCACCCCCCTGCAGCCAACATG CAGAGAATGGACTGGAGTGAGAGGCTGGCTCAACAGGCTCAGACTAGGGCGGCCCTTTGT GGCGCCCCAGCCCCAAGCCTGGCTTCCATCCTCCGGGCCGCACCCCAAGTGGGCTGGAAT GTGCAGCTGCTGCCCAGAGGCTCGGCATCCTTCATCCACGTGGTGAGCCTGTGGTTCTCA GAGGGGCAGCGGTACAGCCACGCAGCGGCCGAGTGTGCCCCCAACGCCACCTGCACCCAC TACACTCAGCTCGTGTGGGCCACCTCAAGCCAGCTGGGCTGTGGGCGGCACCCCTGCTCT GGGGCCCAGGGCGAGATGGAAGCCTTTGTCTGCGCCTACTCTCCCGGGGGCAACTGGGAG GCCAACGGGAGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-154, - strand, RNAz p=0.996065 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-154, - strand, RNAz p=0.996065 |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 1-217, gnl|bosTau2|chr18 (691261-691045) | |
| 1-217, gnl|canFam2|chr5 (79261187-79261909) | |
| 1-217, gnl|dasNov1|scaffold_48288 (2684-1975) | |
| 1-217, gnl|echTel1|scaffold_287597 (92755-92127) | |
| 1-217, gnl|hg17|chr16 (68542360-68543086) | |
| 1-217, gnl|Hg17|chr16 (73012756-73012546) | |
| 1-217, gnl|loxAfr1|scaffold_229616 (7-745) | |
| 1-217, gnl|mm7|chr8 (109682231-109681489) | |
| 1-217, gnl|Mm7|chr8 (109681893-109681677) | |
| 1-217, gnl|monDom2|scaffold_63 (9862452-9861694) | |
| 1-217, gnl|panTro1|chr18 (67398856-67398128) | |
| 1-217, gnl|rheMac2|chr20 (72459456-72458739) | |
| 1-217, gnl|rn3|chr19 (41009770-41009024) | |
| 309-573, gnl|bosTau2|chr18 (688291-688028) | |
| 309-573, gnl|canFam2|chr5 (79264382-79264645) | |
| 309-573, gnl|echTel1|scaffold_287597 (90072-89814) | |
| 309-573, gnl|fr1|chrUn (288933307-288933592) | |
| 309-573, gnl|hg17|chr16 (68545737-68546015) | |
| 309-573, gnl|Hg17|chr16 (73009698-73009433) | |
| 309-573, gnl|loxAfr1|scaffold_230905 (520-242) | |
| 309-573, gnl|mm7|chr8 (109679167-109678881) | |
| 309-573, gnl|Mm7|chr8 (109679165-109678917) | |
| 309-573, gnl|monDom2|scaffold_63 (9852804-9852555) | |
| 309-573, gnl|oryCun1|scaffold_206600 (905-1171) | |
| 309-573, gnl|panTro1|chr18 (67395773-67395495) | |
| 309-573, gnl|rheMac2|chr20 (72456237-72455960) | |
| 309-573, gnl|rn3|chr19 (41006743-41006457) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-217, gnl|bosTau2|chr18 (691261-691045) | |
| 1-217, gnl|canFam2|chr5 (79261187-79261909) | |
| 1-217, gnl|dasNov1|scaffold_48288 (2684-1975) | |
| 1-217, gnl|echTel1|scaffold_287597 (92755-92127) | |
| 1-217, gnl|hg17|chr16 (68542360-68543086) | |
| 1-217, gnl|Hg17|chr16 (73012756-73012546) | |
| 1-217, gnl|loxAfr1|scaffold_229616 (7-745) | |
| 1-217, gnl|mm7|chr8 (109682231-109681489) | |
| 1-217, gnl|Mm7|chr8 (109681893-109681677) | |
| 1-217, gnl|monDom2|scaffold_63 (9862452-9861694) | |
| 1-217, gnl|panTro1|chr18 (67398856-67398128) | |
| 1-217, gnl|rheMac2|chr20 (72459456-72458739) | |
| 1-217, gnl|rn3|chr19 (41009770-41009024) | |
| 309-573, gnl|bosTau2|chr18 (688291-688028) | |
| 309-573, gnl|canFam2|chr5 (79264382-79264645) | |
| 309-573, gnl|echTel1|scaffold_287597 (90072-89814) | |
| 309-573, gnl|fr1|chrUn (288933307-288933592) | |
| 309-573, gnl|hg17|chr16 (68545737-68546015) | |
| 309-573, gnl|Hg17|chr16 (73009698-73009433) | |
| 309-573, gnl|loxAfr1|scaffold_230905 (520-242) | |
| 309-573, gnl|mm7|chr8 (109679167-109678881) | |
| 309-573, gnl|Mm7|chr8 (109679165-109678917) | |
| 309-573, gnl|monDom2|scaffold_63 (9852804-9852555) | |
| 309-573, gnl|oryCun1|scaffold_206600 (905-1171) | |
| 309-573, gnl|panTro1|chr18 (67395773-67395495) | |
| 309-573, gnl|rheMac2|chr20 (72456237-72455960) | |
| 309-573, gnl|rn3|chr19 (41006743-41006457) |