Non-Coding RNA Search

Ss1.1-Liv1-LVR010019D09.5

Sequence:


               
               GTCATTTTTAATGCTGCATAGCATGCCATTGTGAGGATGTTCTATAATTTATATAACCAG
GCCCTTTTAACCCATTACAAATAGTGGAATATCAGAATGACCTAGCAAAAAGCAGGAAAA
ATGTGAGTAAAGAGGTCTCACTAATAAAGTTCCTTTCCTGAAAGGGAA------------
------------------------------------------------------------
------------------------CCTGGGAGGAGCCCCCCCCCAAATAAAGAAGGCTTT
AAGGAAATCATTTTCAAAGAAATTGCGTATTTTCTTGTAATTTCTGCTTTATTAGCTAGT
TGCCAGTTATTTTAGCCACAGGCTTTTCATCTTGTCATTGCTTAACAAATACCTAGAATT
TAGTACTGTGCCTGGAAGTCACTAGTTATTTGACCTTGAGCCATATTTCTTAAGCTCCTT
GAGCTTTATTTTTCTTTTCTGTAAGTACAGTAGTACCTCGTTGAGTGATTGTCAAGAATT
GCCTAAAAATTATGAAATATGGAAAATAGGTACTCAGAATAGGTTTATTTCCATCTTTCC
TTGAGTAATTGCCCATGGCTTTCTGTAATGTTGACACTATTTTATGGCTCATCATTGCCT
CGCTACCAAGCCACTGATTAGCTTTGGAGGAACAAGAGGGTTGTGGTGGCATTTTCAAGG
ATTGTGTCTTCATTTTGTTCTTTTTTATAGTTTATACTTAGATCTTTTCATTCATTGAAG
ATATTTTTCTTTATGTCCTTAGGCATGGTTGTAGCAACTTTGAAATTATTGTTTGATAAT
CTTGATTGTCTTTTTTCTTGAACATGGGTTATTTTCCTTTTTCGTTTAATGTCGGGTAAT
TTTGGATTGTATCCTGGGTGTTGTGAATGATCTAATAGAGGCTGTAGATTTTTTAATTCC
TCCAAATAATATTTTTTTTTTGTCGCAGGCTGTTAACTTGAACTCAGTCTGCAGTCCAAC
TTCCTTGTGGTTCAAATATTGGTTCAATTCTTTTAGCAGGACTGCATGAAGTCTGCGTTA
TGTGCATGCATGGTTTGGAGTCGGGCTTCCTCTCTCTGGCTTTTTCTATTCTGGAATTTC
CCACTTGCCTATACCTCTCCTTTTCTAGACCCTCCCGTGGTACTTCAGGACATTAAGGCT
GCAGGCTTTCTCTTGGAGTTTTAACTGCCCAACATGGGATAGACTGGGGTCTGCCTTTAG
GCTGAGAGATTTGAGGGATAAAAAAAGAACCCTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCATTTTTAATGCTGCATAGCATGCCATTGTGAGGATGTTCTATAATTTATATAACCAG
GCCCTTTTAACCCATTACAAATAGTGGAATATCAGAATGACCTAGCAAAAAGCAGGAAAA
ATGTGAGTAAAGAGGTCTCACTAATAAAGTTCCTTTCCTGAAAGGGAA------------
------------------------------------------------------------
------------------------CCTGGGAGGAGCCCCCCCCCAAATAAAGAAGGCTTT
AAGGAAATCATTTTCAAAGAAATTGCGTATTTTCTTGTAATTTCTGCTTTATTAGCTAGT
TGCCAGTTATTTTAGCCACAGGCTTTTCATCTTGTCATTGCTTAACAAATACCTAGAATT
TAGTACTGTGCCTGGAAGTCACTAGTTATTTGACCTTGAGCCATATTTCTTAAGCTCCTT
GAGCTTTATTTTTCTTTTCTGTAAGTACAGTAGTACCTCGTTGAGTGATTGTCAAGAATT
GCCTAAAAATTATGAAATATGGAAAATAGGTACTCAGAATAGGTTTATTTCCATCTTTCC
TTGAGTAATTGCCCATGGCTTTCTGTAATGTTGACACTATTTTATGGCTCATCATTGCCT
CGCTACCAAGCCACTGATTAGCTTTGGAGGAACAAGAGGGTTGTGGTGGCATTTTCAAGG
ATTGTGTCTTCATTTTGTTCTTTTTTATAGTTTATACTTAGATCTTTTCATTCATTGAAG
ATATTTTTCTTTATGTCCTTAGGCATGGTTGTAGCAACTTTGAAATTATTGTTTGATAAT
CTTGATTGTCTTTTTTCTTGAACATGGGTTATTTTCCTTTTTCGTTTAATGTCGGGTAAT
TTTGGATTGTATCCTGGGTGTTGTGAATGATCTAATAGAGGCTGTAGATTTTTTAATTCC
TCCAAATAATATTTTTTTTTTGTCGCAGGCTGTTAACTTGAACTCAGTCTGCAGTCCAAC
TTCCTTGTGGTTCAAATATTGGTTCAATTCTTTTAGCAGGACTGCATGAAGTCTGCGTTA
TGTGCATGCATGGTTTGGAGTCGGGCTTCCTCTCTCTGGCTTTTTCTATTCTGGAATTTC
CCACTTGCCTATACCTCTCCTTTTCTAGACCCTCCCGTGGTACTTCAGGACATTAAGGCT
GCAGGCTTTCTCTTGGAGTTTTAACTGCCCAACATGGGATAGACTGGGGTCTGCCTTTAG
GCTGAGAGATTTGAGGGATAAAAAAAGAACCCTCAT

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               1-171, gnl|bosTau2|chr24 (32039254-32039085)
               

               
               1-171, gnl|Hg17|chr18 (9095056-9095219)
               


               
               213-977, gnl|bosTau2|chr24 (32039067-32038271)
               

               
               213-977, gnl|Hg17|chr18 (9095235-9096114)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-171, gnl|bosTau2|chr24 (32039254-32039085)
               

               
               1-171, gnl|Hg17|chr18 (9095056-9095219)
               


               
               213-977, gnl|bosTau2|chr24 (32039067-32038271)
               

               
               213-977, gnl|Hg17|chr18 (9095235-9096114)

	1-171, gnl\|bosTau2\|chr24 (32039254-32039085)
	1-171, gnl\|Hg17\|chr18 (9095056-9095219)

	213-977, gnl\|bosTau2\|chr24 (32039067-32038271)
	213-977, gnl\|Hg17\|chr18 (9095235-9096114)