Ss1.1-Liv1-LVR010026B11.5
|
TTCGTGTAGGGGAGGCTGGAAGCCGCAGGAGCGGGAGACGGTGGAGGGGATTTTGAGAAG
AAAACTGCGGTAGCGACCTCACTCGGTGGTACAAGAGGGGAACGCTAGTCCCTCCGAAAG
CCGGGTTACTGCGAACGCACCAGCTGAGCCCTTAGTACTGCAACCCCCACCCTCCTTTGG
TTTGTGGAGGAGCCTGACCACTCTGCCTCTTATGGCCACAATGCTGACCGCCCGCCTCTC
CAGACCCCTGTCGCAGCTCCCAAGGAAAACCCTGAATTTCTCTGAGAGAGAAAATGGAGC
AAGAGGCTCGCTGCTGTTTTACTCTCCCTCCTTTGTCCCTGGCAGCCGTCGGACTTATGC
TGATTCGGTGAACCCGGTTGGCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTGGATT
TGGGTTCTCACTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTATTTGCTGGCTGCTT
GATGAAGGACAAAGGGCATGACGGGGTCAAGGAACTGGACAGCTTGAAGAGTGATCGATT
AAGAACCGTCCAGCTCAATGTCTGCAAAAGTGAAGAAGTAGAGAAAGTGGTGGAGACCAT
CCGCTCGAGCTTGCAGGACCCTGAGAAAGGCTTGTGGGGCCTGGTTAACAATGCAGGCAT
CTCAACGTTCGGGGACGTGGAATTCACCAGCATGGAGACCTACAAGGAGGTGGCAGAAGT
GAACCTCTGGGGCACGGTGCGGGTGACAAAATCCTTTCTCCCTCTCATCCGGAGGGCCAA
AAGGCCGCGTGGTCAACATCAGCAGCATAATGGGCGCTTGGCCAATGTGAGCCGCTCCCC
CTACTGCATCACCAAGTTCGGGGTGGAGGCTTTCTCTGACTGCCTGCGCTACGAGATGCA
CCCTCTAGGAGTGAAGGTCAGCGTGGTGGAGCCCGGCAACTTCATCGTCGCCACCAGCCT
CTACAGCCCTGAGCGCATCCGGGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCGTGTAGGGGAGGCTGGAAGCCGCAGGAGCGGGAGACGGTGGAGGGGATTTTGAGAAG
AAAACTGCGGTAGCGACCTCACTCGGTGGTACAAGAGGGGAACGCTAGTCCCTCCGAAAG
CCGGGTTACTGCGAACGCACCAGCTGAGCCCTTAGTACTGCAACCCCCACCCTCCTTTGG
TTTGTGGAGGAGCCTGACCACTCTGCCTCTTATGGCCACAATGCTGACCGCCCGCCTCTC
CAGACCCCTGTCGCAGCTCCCAAGGAAAACCCTGAATTTCTCTGAGAGAGAAAATGGAGC
AAGAGGCTCGCTGCTGTTTTACTCTCCCTCCTTTGTCCCTGGCAGCCGTCGGACTTATGC
TGATTCGGTGAACCCGGTTGGCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTGGATT
TGGGTTCTCACTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTATTTGCTGGCTGCTT
GATGAAGGACAAAGGGCATGACGGGGTCAAGGAACTGGACAGCTTGAAGAGTGATCGATT
AAGAACCGTCCAGCTCAATGTCTGCAAAAGTGAAGAAGTAGAGAAAGTGGTGGAGACCAT
CCGCTCGAGCTTGCAGGACCCTGAGAAAGGCTTGTGGGGCCTGGTTAACAATGCAGGCAT
CTCAACGTTCGGGGACGTGGAATTCACCAGCATGGAGACCTACAAGGAGGTGGCAGAAGT
GAACCTCTGGGGCACGGTGCGGGTGACAAAATCCTTTCTCCCTCTCATCCGGAGGGCCAA
AAGGCCGCGTGGTCAACATCAGCAGCATAATGGGCGCTTGGCCAATGTGAGCCGCTCCCC
CTACTGCATCACCAAGTTCGGGGTGGAGGCTTTCTCTGACTGCCTGCGCTACGAGATGCA
CCCTCTAGGAGTGAAGGTCAGCGTGGTGGAGCCCGGCAACTTCATCGTCGCCACCAGCCT
CTACAGCCCTGAGCGCATCCGGGC
|
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gi|17939514|gb|AAH19317.1| |
Protein identifier
|
gi|17939514|gb|AAH19317.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
486-630, gnl|bosTau2|chr1 (44711299-44711443) |
|
486-630, gnl|Hg17|chr3 (198737964-198737820) |
|
486-630, gnl|Mm7|chr16 (31124251-31124395) |
| |
|
782-984, gnl|bosTau2|chr1 (44720059-44720265) |
|
782-984, gnl|canFam2|chr33 (33446186-33446611) |
|
782-984, gnl|danRer3|chrUn (11846580-11846167) |
|
782-984, gnl|dasNov1|scaffold_33511 (31460-31884) |
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782-984, gnl|echTel1|scaffold_302712 (13561-13988) |
|
782-984, gnl|fr1|chrUn (30561693-30561277) |
|
782-984, gnl|galGal2|chr9 (12050617-12051037) |
|
782-984, gnl|hg17|chr3 (198727066-198727491) |
|
782-984, gnl|Hg17|chr3 (198727547-198727344) |
|
782-984, gnl|mm7|chr16 (31131542-31131110) |
|
782-984, gnl|Mm7|chr16 (31131052-31131255) |
|
782-984, gnl|monDom2|scaffold_248 (396870-397298) |
|
782-984, gnl|oryCun1|scaffold_199514 (28046-27621) |
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782-984, gnl|panTro1|chr2 (203012980-203013405) |
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782-984, gnl|rheMac2|chr2 (187897384-187896959) |
|
782-984, gnl|rn3|chr11 (71188512-71188944) |
|
782-984, gnl|tetNig1|chr6 (3359489-3359899) |
|
782-984, gnl|xenTro1|scaffold_344 (531495-531070) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
486-630, gnl|bosTau2|chr1 (44711299-44711443) |
|
486-630, gnl|Hg17|chr3 (198737964-198737820) |
|
486-630, gnl|Mm7|chr16 (31124251-31124395) |
| |
|
782-984, gnl|bosTau2|chr1 (44720059-44720265) |
|
782-984, gnl|canFam2|chr33 (33446186-33446611) |
|
782-984, gnl|danRer3|chrUn (11846580-11846167) |
|
782-984, gnl|dasNov1|scaffold_33511 (31460-31884) |
|
782-984, gnl|echTel1|scaffold_302712 (13561-13988) |
|
782-984, gnl|fr1|chrUn (30561693-30561277) |
|
782-984, gnl|galGal2|chr9 (12050617-12051037) |
|
782-984, gnl|hg17|chr3 (198727066-198727491) |
|
782-984, gnl|Hg17|chr3 (198727547-198727344) |
|
782-984, gnl|mm7|chr16 (31131542-31131110) |
|
782-984, gnl|Mm7|chr16 (31131052-31131255) |
|
782-984, gnl|monDom2|scaffold_248 (396870-397298) |
|
782-984, gnl|oryCun1|scaffold_199514 (28046-27621) |
|
782-984, gnl|panTro1|chr2 (203012980-203013405) |
|
782-984, gnl|rheMac2|chr2 (187897384-187896959) |
|
782-984, gnl|rn3|chr11 (71188512-71188944) |
|
782-984, gnl|tetNig1|chr6 (3359489-3359899) |
|
782-984, gnl|xenTro1|scaffold_344 (531495-531070) |
