Non-Coding RNA Search

Ss1.1-Liv1-LVR010031C09.5

Sequence:


               
               GGCCGGCAGGAGGGGGCGGTTGCCGCGGGCCCGGGGCGGAGACAGCACGCAGCCTCGCCG
CGCGCACCCCCGCCCGGCAGCGGCCCCGACTCCCGGGGCGAGCGGGAAAGCGGCGGCGGC
GGTAGCGGCAGCGGCGGCCGGGGGAAGGATGCAGGGGAAGAAGCCGGGCGGCTCGTCGGG
CGGCGGCCGGAGCGGCGAGCTGCAAGGGGACGAGGCGCAGAGGAACAAGAAGAAGAAAAA
GAAGGTGTCCTGCTTCTCCAACATCAAGATCTTCCTGGTGTCCGAGTGCGCCCTGATGCT
AGCGCAGGGCACGGTGGGCGCCTACCTGGTGAGCGTCCTCACCACCCTGGAGCGGAGGTT
CAACCTGCAGAGCGCCGACGTGGGCGTGATCGCCAGCAGCTTCGAGATCGGGAACCTGGC
ACTCATCCTCTTCGTGAGCTACTTCGGGGCTCGCGGTCACCGGCCCCGCCTCATCGGCTG
CGGGGGCATCGTCATGGCCCTGGGCGCGCTGCTGTCGGCGCTGCCGGAGTTCCTGACCCA
CCAGTACAAGTACGAGGCGGGTGAGATCCGCTGGGGTGCCGAGGGCCGAGATGTCTGCGC
CGCCAACGGCTCGGGCGGGGACCAGGGGCCCGACCCGGACCTCATCTGCCGCAGTCGCAC
CGCCACCAACATGATGTACTTGCTGCTCATTGGGGCCCAGGTACTCCTGGGCATCGGTGC
TACCCCCGTGCAGCCCCTGGGTGTCTCCTACATCGACGATCACGTGCGGAGGAAGGATTC
CTCACTCTACATAGGTATCCTGTTCACGATGCTGGTGTTTGGACCCGCCTGCGGATTTAT
CCTGGGCTCTTTCTGTACCAAAATCTATGTGGATGCAGTCTTCATTGACACAAGTAACCT
GGACATCACCCCGGACGACCCCCGCTGGATTGGAGCCTGGTGGGGTGGCTTTCTGCTCTG
CGGTGCCTTACTCTTCTTCTCTTCCCTCTTGATGTTCGGGTTTCCACAGTCTCTGCCCCC
GCACTCAGACCCTGCCCTGGAGAGCGAGCAGGCCATGCTCCCCGAAAGAGAATACGAGAG
ACCCAAGCCCAGCAACGGGGTCCTGAGGCACCCCTTGGAGCCGGACACCAGCGCCTCCTG
CTTCCAGCAGCTGAGAGTGATCCCGAAGGTCACCAAGCACCTGCTCTCAAACCCTGTGTT
CACCTGCATTATCCTGGCCGCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCGGCAGGAGGGGGCGGTTGCCGCGGGCCCGGGGCGGAGACAGCACGCAGCCTCGCCG
CGCGCACCCCCGCCCGGCAGCGGCCCCGACTCCCGGGGCGAGCGGGAAAGCGGCGGCGGC
GGTAGCGGCAGCGGCGGCCGGGGGAAGGATGCAGGGGAAGAAGCCGGGCGGCTCGTCGGG
CGGCGGCCGGAGCGGCGAGCTGCAAGGGGACGAGGCGCAGAGGAACAAGAAGAAGAAAAA
GAAGGTGTCCTGCTTCTCCAACATCAAGATCTTCCTGGTGTCCGAGTGCGCCCTGATGCT
AGCGCAGGGCACGGTGGGCGCCTACCTGGTGAGCGTCCTCACCACCCTGGAGCGGAGGTT
CAACCTGCAGAGCGCCGACGTGGGCGTGATCGCCAGCAGCTTCGAGATCGGGAACCTGGC
ACTCATCCTCTTCGTGAGCTACTTCGGGGCTCGCGGTCACCGGCCCCGCCTCATCGGCTG
CGGGGGCATCGTCATGGCCCTGGGCGCGCTGCTGTCGGCGCTGCCGGAGTTCCTGACCCA
CCAGTACAAGTACGAGGCGGGTGAGATCCGCTGGGGTGCCGAGGGCCGAGATGTCTGCGC
CGCCAACGGCTCGGGCGGGGACCAGGGGCCCGACCCGGACCTCATCTGCCGCAGTCGCAC
CGCCACCAACATGATGTACTTGCTGCTCATTGGGGCCCAGGTACTCCTGGGCATCGGTGC
TACCCCCGTGCAGCCCCTGGGTGTCTCCTACATCGACGATCACGTGCGGAGGAAGGATTC
CTCACTCTACATAGGTATCCTGTTCACGATGCTGGTGTTTGGACCCGCCTGCGGATTTAT
CCTGGGCTCTTTCTGTACCAAAATCTATGTGGATGCAGTCTTCATTGACACAAGTAACCT
GGACATCACCCCGGACGACCCCCGCTGGATTGGAGCCTGGTGGGGTGGCTTTCTGCTCTG
CGGTGCCTTACTCTTCTTCTCTTCCCTCTTGATGTTCGGGTTTCCACAGTCTCTGCCCCC
GCACTCAGACCCTGCCCTGGAGAGCGAGCAGGCCATGCTCCCCGAAAGAGAATACGAGAG
ACCCAAGCCCAGCAACGGGGTCCTGAGGCACCCCTTGGAGCCGGACACCAGCGCCTCCTG
CTTCCAGCAGCTGAGAGTGATCCCGAAGGTCACCAAGCACCTGCTCTCAAACCCTGTGTT
CACCTGCATTATCCTGGCCGCCTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|37359722|dbj|BAC97835.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|37359722|dbj|BAC97835.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               271-532, gnl|bosTau2|chr13 (35810871-35810607)
               

               
               271-532, gnl|Hg17|chr20 (60758563-60758827)
               

               
               271-532, gnl|Mm7|chr2 (180965248-180965512)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               271-532, gnl|bosTau2|chr13 (35810871-35810607)
               

               
               271-532, gnl|Hg17|chr20 (60758563-60758827)
               

               
               271-532, gnl|Mm7|chr2 (180965248-180965512)

	271-532, gnl\|bosTau2\|chr13 (35810871-35810607)
	271-532, gnl\|Hg17\|chr20 (60758563-60758827)
	271-532, gnl\|Mm7\|chr2 (180965248-180965512)