Non-Coding RNA Search

Ss1.1-Liv1-LVR010042H03.5

Sequence:


               
               AAGACAAAAAAAAAAAGAATAATTATTTTGATATCATTACCACTCCTATTATTTATTTCA
AGGTTGCAGAAGTGGAACTAGTTCAATATTTAATAATCCAACATTTTATATGTATTCTAT
AATATTATACTTGAGTATGGGTTTTAGATGCTCTGTGTTCTTTCTGGGACAATTTAAATC
TGTGCTTCACTGTTTTACATGAAATTGTGTATGTGTTATAAATCTTTTATTTGGGTTTTG
GAAGTTTTAATAATTGGCATATCATGGAAATATTTTTGTTACATTTTAAATTATGATATA
TAAACATACAGAAAAGCAAGATGAAACATATTAATCATATTACCATATATATTTGAGATT
ACTGAATATTCCATCAATTTGCAGAACATAATTTAAGTACCATTTGCAACAATATGTACA
AGTGACTAAAATCCAACAAAAGACATGTAGGAAAAAATTATACAACTTTATTGAAAAACC
TAAGAGCTAACTAAATGGAGAGGTACTATACTTTTGAATGGGAAAGCCTAAGAATAGAAA
TTCTCCCCAAATAAATCTGATAAGTTCAGTAATACAATTCTGATCAAAATCTCAAGTAGT
AATTTTTACAGTATCAGACACTCTCATTTTAAAATTGATATTCAAGCTTGAGGGGCAAAA
GAGTCAAATGATTCTGAAGAACAATTTAGGTGAACTTATCCACCACATATGAAGATTTAT
ACTCTGCCACAGAAAGCAGTAGTAGTTAAGTACTGCGATAATGACCCCAGTAAACAAACT
AACTACCTTATCACCCTTGTTTCTTAACTCCTCTTTGTGTACAACTACAAGCTGGCCAAA
CTGAACTATACATGCCAACATTCATGCCTTGGGAATTCTAGTCCTATGCCTTTGGTGTTT
CTGCTGTCTACAGAATTCCCTTCATCCTTGTCTCCTGTACTTCACTGAACCTAAGGTGCA
TTATTATTTATGTACAAGAAAAAATGTTGCCATTTAAGTTGCCACGTCATCACTGCCGGA
TACCTTGTGTTTCAGAGATATTAAAATATGAAAATATGTGTCTTAGGATCTTTGGAACAT
GCTATTGCAATGCCAGTGTCTCTACAATAAATAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGACAAAAAAAAAAAGAATAATTATTTTGATATCATTACCACTCCTATTATTTATTTCA
AGGTTGCAGAAGTGGAACTAGTTCAATATTTAATAATCCAACATTTTATATGTATTCTAT
AATATTATACTTGAGTATGGGTTTTAGATGCTCTGTGTTCTTTCTGGGACAATTTAAATC
TGTGCTTCACTGTTTTACATGAAATTGTGTATGTGTTATAAATCTTTTATTTGGGTTTTG
GAAGTTTTAATAATTGGCATATCATGGAAATATTTTTGTTACATTTTAAATTATGATATA
TAAACATACAGAAAAGCAAGATGAAACATATTAATCATATTACCATATATATTTGAGATT
ACTGAATATTCCATCAATTTGCAGAACATAATTTAAGTACCATTTGCAACAATATGTACA
AGTGACTAAAATCCAACAAAAGACATGTAGGAAAAAATTATACAACTTTATTGAAAAACC
TAAGAGCTAACTAAATGGAGAGGTACTATACTTTTGAATGGGAAAGCCTAAGAATAGAAA
TTCTCCCCAAATAAATCTGATAAGTTCAGTAATACAATTCTGATCAAAATCTCAAGTAGT
AATTTTTACAGTATCAGACACTCTCATTTTAAAATTGATATTCAAGCTTGAGGGGCAAAA
GAGTCAAATGATTCTGAAGAACAATTTAGGTGAACTTATCCACCACATATGAAGATTTAT
ACTCTGCCACAGAAAGCAGTAGTAGTTAAGTACTGCGATAATGACCCCAGTAAACAAACT
AACTACCTTATCACCCTTGTTTCTTAACTCCTCTTTGTGTACAACTACAAGCTGGCCAAA
CTGAACTATACATGCCAACATTCATGCCTTGGGAATTCTAGTCCTATGCCTTTGGTGTTT
CTGCTGTCTACAGAATTCCCTTCATCCTTGTCTCCTGTACTTCACTGAACCTAAGGTGCA
TTATTATTTATGTACAAGAAAAAATGTTGCCATTTAAGTTGCCACGTCATCACTGCCGGA
TACCTTGTGTTTCAGAGATATTAAAATATGAAAATATGTGTCTTAGGATCTTTGGAACAT
GCTATTGCAATGCCAGTGTCTCTACAATAAATAATC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               15-412, gnl|bosTau2|chr7 (66312491-66312889)
               

               
               15-412, gnl|Hg17|chr5 (107654795-107654398)
               


               
               477-969, gnl|bosTau2|chr7 (66313014-66313515)
               

               
               477-969, gnl|Hg17|chr5 (107654309-107653782)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-412, gnl|bosTau2|chr7 (66312491-66312889)
               

               
               15-412, gnl|Hg17|chr5 (107654795-107654398)
               


               
               477-969, gnl|bosTau2|chr7 (66313014-66313515)
               

               
               477-969, gnl|Hg17|chr5 (107654309-107653782)

	15-412, gnl\|bosTau2\|chr7 (66312491-66312889)
	15-412, gnl\|Hg17\|chr5 (107654795-107654398)

	477-969, gnl\|bosTau2\|chr7 (66313014-66313515)
	477-969, gnl\|Hg17\|chr5 (107654309-107653782)