Ss1.1-Liv1-LVR010047G09.5
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TTTATGTAAAGCATAGTACAGCAATATTACATCAAAATTTTATTGCCACGAGTTTGGGAT
GACATCTTATAAGTGGCAAAGCCACAAGTGAGTTATGCAGGTCATCTCAAGTAAATGCCA
ATAAAATGTTTTTACTGTACCACATCATCCGGTATTTTGCCTATGCTACAAATTTAAAAG
AGAACCAATTTTAGAAATTTCCAGAGTTGTAAAAGTTTTTATTGGCACTATATTTCAAGC
TTGCTGTCCTGTAAATATTGGTTCCATTAATTGTGGTAAAGATTAGTGCAGGGAGAGTTA
AAAAAAAAAAAAAAAAACTACTCATGATAGGGGTCTTTTCTTAAAACATATTTCTTTCTA
GTTTAGTTCCATTTTTTTTCTCAGTTCTAAGTATAAATAGTATCTTCTCTCTTCTCTTTT
TATGTAGTTTTCTCTTTTCAAAAGCTCCCTCAAGCCCCAGCTCCAAAGATACTTCATATC
ACCCCTAAGTTTGATCTCATTTTTCTGAACACAAACTTTTAATGATTGGCATGTTTTTTA
TTGCTTTTAAAACACTCTTTTAGTTGTGTTTTACTGTTAAACTATTAACTTAAAGTTTAT
CATTTTTAAGCTTTTAACTTATACGTATACTGTCTTTCTGAAATGAATTCTGAGCTCCTA
GAGAGCATATTCAGTGCTTTGTGTTGTTCCTGGCCTCTAGTATTTTTGTTTATTTGTTTT
TAATGTCCTTTCCTTTTTTCTCTCCCTCCTTTCCTTCCACAGACATTGATGTAGTTCCTA
CCATTTATTTTCATGCCTAAATAGACATTGGATATTGAAGATGAAAGGCTGCTTAGAAAA
GAGCATGTAGAAGTGGTTCTTAGAATACAGTGAACCTAACAGTACCTTAAGCAAACCTGT
TAAGGAAATCTGCTCCCAAGCCTTACACCCAGAGATCCAGGGATGGGAACCAAAGACCTA
AGCTTCTAGATACCAGGTCGTTCTGAGGCAGGGCGCCCACAGACTGAGAACTCCCAGTTA
CAGGTGAAGGGAGAATGCACCATAAGCCACGCATCATAATGCTCCACT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TTTATGTAAAGCATAGTACAGCAATATTACATCAAAATTTTATTGCCACGAGTTTGGGAT
GACATCTTATAAGTGGCAAAGCCACAAGTGAGTTATGCAGGTCATCTCAAGTAAATGCCA
ATAAAATGTTTTTACTGTACCACATCATCCGGTATTTTGCCTATGCTACAAATTTAAAAG
AGAACCAATTTTAGAAATTTCCAGAGTTGTAAAAGTTTTTATTGGCACTATATTTCAAGC
TTGCTGTCCTGTAAATATTGGTTCCATTAATTGTGGTAAAGATTAGTGCAGGGAGAGTTA
AAAAAAAAAAAAAAAAACTACTCATGATAGGGGTCTTTTCTTAAAACATATTTCTTTCTA
GTTTAGTTCCATTTTTTTTCTCAGTTCTAAGTATAAATAGTATCTTCTCTCTTCTCTTTT
TATGTAGTTTTCTCTTTTCAAAAGCTCCCTCAAGCCCCAGCTCCAAAGATACTTCATATC
ACCCCTAAGTTTGATCTCATTTTTCTGAACACAAACTTTTAATGATTGGCATGTTTTTTA
TTGCTTTTAAAACACTCTTTTAGTTGTGTTTTACTGTTAAACTATTAACTTAAAGTTTAT
CATTTTTAAGCTTTTAACTTATACGTATACTGTCTTTCTGAAATGAATTCTGAGCTCCTA
GAGAGCATATTCAGTGCTTTGTGTTGTTCCTGGCCTCTAGTATTTTTGTTTATTTGTTTT
TAATGTCCTTTCCTTTTTTCTCTCCCTCCTTTCCTTCCACAGACATTGATGTAGTTCCTA
CCATTTATTTTCATGCCTAAATAGACATTGGATATTGAAGATGAAAGGCTGCTTAGAAAA
GAGCATGTAGAAGTGGTTCTTAGAATACAGTGAACCTAACAGTACCTTAAGCAAACCTGT
TAAGGAAATCTGCTCCCAAGCCTTACACCCAGAGATCCAGGGATGGGAACCAAAGACCTA
AGCTTCTAGATACCAGGTCGTTCTGAGGCAGGGCGCCCACAGACTGAGAACTCCCAGTTA
CAGGTGAAGGGAGAATGCACCATAAGCCACGCATCATAATGCTCCACT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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16-141, + strand, RNAmicro p=0.999244 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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16-141, + strand, RNAmicro p=0.999244 |
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1-158, BP457390 full-length enriched swine cDNA library, adult ovary Sus
(dbj|BP457390.1|), blast E-value=0, identity=100% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
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1-158, BP457390 full-length enriched swine cDNA library, adult ovary Sus
(dbj|BP457390.1|), blast E-value=0, identity=100% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map