Ss1.1-Liv1-LVR010053A07.5
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ACTGAGTGGGAGCTGTGTTGACTACCATTACGTCTTCGTTTGTCCTCAATTATGTCTGGG
ATGGTGGCTCTGCGGCTCCCCAGAGGCCTTTGGACAGCGGCCGTGACGATGATGCTGGTG
GTGCTGGGTGCTCCGGTGGCTGAGGGCAGAGACTCTCCACAGGATTTCGTGTTCCAGTTT
AAGTTCGAGTGCTACTTCTTCAACGGAACGCAGCGGGTGCGGCTCGTGGCCAGATACATC
TACAACCAGGAGGAGCTTTTGCGCTTCGACAGCGACGTGGGGGAATACCGGGCGGTGACC
CCGCTGGGGCGGCCGGAGGCCGACTCCTGGAACGGCCAGAAGGACGTCCTGGAGCAGACG
CGGGCCGAGCTGGACACGGTGTGCAAACACAACTACCAGATAGAGGAAGGCACGACTCTG
CAGCGGCGAGTGCAACCTACAGTGACTATCTCCCCATCCAAGGCAGAGGCTCTAAACCAC
CACAACCTGCTGGTCTGTGCGGTGACAGATTTCTATCCAAGCCAGGTGAAAGTCCAGTGG
TTCCGGAATGGCCAGGAGGAGACAGCTGGCGTTGTGTCCACTCCTCTTATTAGGAACGGA
GACTGGACCTACCAGGTGCTCGTGATGCTAGAGATGAATCTCCAGCGAGGAGATGTCTAC
ACCTGCCGCGTGGAGCACTCCAGCCTCCAGAGCCCCATCTTGGTGGAGTGGCGGGCACAG
TCTGAATCTGCCCAGAGCAAGATGCTGAGCGGTGTCGGGGGCTTCGTGCTGGGGCTGATC
TTCCTCGGGCTGGGCCTTTTCATC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ACTGAGTGGGAGCTGTGTTGACTACCATTACGTCTTCGTTTGTCCTCAATTATGTCTGGG
ATGGTGGCTCTGCGGCTCCCCAGAGGCCTTTGGACAGCGGCCGTGACGATGATGCTGGTG
GTGCTGGGTGCTCCGGTGGCTGAGGGCAGAGACTCTCCACAGGATTTCGTGTTCCAGTTT
AAGTTCGAGTGCTACTTCTTCAACGGAACGCAGCGGGTGCGGCTCGTGGCCAGATACATC
TACAACCAGGAGGAGCTTTTGCGCTTCGACAGCGACGTGGGGGAATACCGGGCGGTGACC
CCGCTGGGGCGGCCGGAGGCCGACTCCTGGAACGGCCAGAAGGACGTCCTGGAGCAGACG
CGGGCCGAGCTGGACACGGTGTGCAAACACAACTACCAGATAGAGGAAGGCACGACTCTG
CAGCGGCGAGTGCAACCTACAGTGACTATCTCCCCATCCAAGGCAGAGGCTCTAAACCAC
CACAACCTGCTGGTCTGTGCGGTGACAGATTTCTATCCAAGCCAGGTGAAAGTCCAGTGG
TTCCGGAATGGCCAGGAGGAGACAGCTGGCGTTGTGTCCACTCCTCTTATTAGGAACGGA
GACTGGACCTACCAGGTGCTCGTGATGCTAGAGATGAATCTCCAGCGAGGAGATGTCTAC
ACCTGCCGCGTGGAGCACTCCAGCCTCCAGAGCCCCATCTTGGTGGAGTGGCGGGCACAG
TCTGAATCTGCCCAGAGCAAGATGCTGAGCGGTGTCGGGGGCTTCGTGCTGGGGCTGATC
TTCCTCGGGCTGGGCCTTTTCATC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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154-399, gnl|bosTau2|chr23 (22932416-22932663) |
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154-399, gnl|Hg17|chr6 (32633950-32633703) |
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154-399, gnl|Mm7|chr17 (32386907-32387154) |
| |
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429-713, gnl|bosTau2|chr23 (5446517-5446233) |
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429-713, gnl|canFam2|chr12 (5382994-5383292) |
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429-713, gnl|dasNov1|scaffold_148284 (292-4) |
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429-713, gnl|echTel1|scaffold_68652 (768-472) |
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429-713, gnl|hg17|chr6 (32807162-32807454) |
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429-713, gnl|Hg17|chr6 (32807452-32807174) |
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429-713, gnl|loxAfr1|scaffold_115569 (4276-3994) |
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429-713, gnl|mm7|chr17 (32391791-32391493) |
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429-713, gnl|Mm7|chr17 (32345159-32345443) |
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429-713, gnl|monDom2|scaffold_42 (462853-463154) |
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429-713, gnl|oryCun1|scaffold_178605 (31791-32089) |
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429-713, gnl|panTro1|chr5 (33249958-33250250) |
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429-713, gnl|rheMac2|chr4 (32393778-32394077) |
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429-713, gnl|rn3|chr20 (4733016-4733314) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
154-399, gnl|bosTau2|chr23 (22932416-22932663) |
|
154-399, gnl|Hg17|chr6 (32633950-32633703) |
|
154-399, gnl|Mm7|chr17 (32386907-32387154) |
| |
|
429-713, gnl|bosTau2|chr23 (5446517-5446233) |
|
429-713, gnl|canFam2|chr12 (5382994-5383292) |
|
429-713, gnl|dasNov1|scaffold_148284 (292-4) |
|
429-713, gnl|echTel1|scaffold_68652 (768-472) |
|
429-713, gnl|hg17|chr6 (32807162-32807454) |
|
429-713, gnl|Hg17|chr6 (32807452-32807174) |
|
429-713, gnl|loxAfr1|scaffold_115569 (4276-3994) |
|
429-713, gnl|mm7|chr17 (32391791-32391493) |
|
429-713, gnl|Mm7|chr17 (32345159-32345443) |
|
429-713, gnl|monDom2|scaffold_42 (462853-463154) |
|
429-713, gnl|oryCun1|scaffold_178605 (31791-32089) |
|
429-713, gnl|panTro1|chr5 (33249958-33250250) |
|
429-713, gnl|rheMac2|chr4 (32393778-32394077) |
|
429-713, gnl|rn3|chr20 (4733016-4733314) |
