Ss1.1-Liv1-LVR010057F04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCACGACCTCGCCTCAGTGAGGCCTGAGATTCTTTCGAACAGGAGCTTTGCTTTCCCAT GACGCAGAGCGAAGTGTCAACTGGGATCTTTCTGGTAATACTGAAAGCAAGACAAGCAGA GTGCACACTTCACAAGGCACGAGTCCCCGAGGGACCAGGGGAGGGCTGGGGTGCCATCCC CGGTGACAGATGGATGGACCTTTCATCTGAGAGAAAGGAGACGACACGTTGGTGAATCAA CTTCAAACCCAGGAGTGCCTGCGAAGCCATCACAAAGGGGAAAACACACACACACCAGCA AGAAGATCAAAAAGACCAGCAGGGCGCGAATCGTTGCAAACTCCCGGCTTGGGCAGCTCC TCACCTGACCCAGAAGCAACATGTCCCTGAAGCTGCCGAGAAACTGGGACTTCAGCCTGC GAGGGGAGGCTGGGAAAATAGCTCGGTCAAGGAGCGTGATGACCGGTGAGCAGATGGCGG CCTTTCACCCCGCATCCAGCCCCAACCCGCTGGAAAGGCCCATCAAGATGGGCTGGCTGA AGAAGCAGAGGTCCATCGTGAAAAACTGGCAGCAGAGGTACTTCGTGCTGAGGGCGCAGC AGCTCTATTACTACAAGGACGAGGAGGACGTGAAGCCACAGGGTTACATGTATCTCCCAG GAAGTACAATCAAGGAGATTGCCACAAACCCAGAAGAAGCGGGGAAGTTTGTCTTTGAAG TCATTCCAGCCTCATGTGACCAGAGTCGCACGGGACAGGACTCCTATGTCCTCATGGCCA GCTCCCAGGCGGAAATGGAGGAGTGGGTTAAATTCCTTAGGAGAGTCGCTGGCACGCCCT GTGGAGCGGTGTTCGGCCAGCGCTTGGATGAGACCGTGGCCTATGAGCAGAAATTTGGCC CCCACCTGGTGCCCATCCTGGTGGAGAAGTGTGCCGAGTTCATCCTGGAGCATGGCCTGA ATGAAGAGGGCATCTTCCGACTGCCTGGGCAGGACAACCTGGTGAAGCAGCTGAGAGATG CTTTTGACGCGGGGGAGCGGCCCAACTTTGACAGAGATACAGATGTGCACACAGTGGCCT CCCTGCTGAAGCTCTACCTCCGAGACCTCCCAGAACCAGTGGTTCCCTGGAGCCAGTATG AGGGGTTCCTGCTGTGTGGGCAGCTCATGAATGCAGATGAGGCAAAGGCTCAGCAGGAGC TGGTGAAGCAGCTCTCCATCCTTCCTCGAGACAACTATAGCCTCCTGAGCTACATCTGCA GGTTCCTCCACGAAATCCAGCTGAACTGTGGAGTTAACAAGATGAGTGTGGACAATCTGG CTACTGTAATTGGTGTGAATCTCATCAGGTCAAAAGTCGAAGACCCTGCCGTGATCATGA GAGGGACTCCTCAGATCCAAAGAGTGATGACCATGATGATCAGAGACCATGAAGTCCTCT TCCCCAAGTCTAAGGATGCACCCTTATCCCCTCCTGCCCCCAAAAACGACCCCAAGAAAC CTCCAGTGGCACGAAGCTCTGTGGGCTGGGATGCCTCTGAGGACCCTCCAATTTCTAGGA CAGACAGCATTAATAACATGGCCAGCGACTCCGACGCAACCAGTCCTACTGGACAACGGC CAAATGATGGGTGTCTAGAAGACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCACGACCTCGCCTCAGTGAGGCCTGAGATTCTTTCGAACAGGAGCTTTGCTTTCCCAT GACGCAGAGCGAAGTGTCAACTGGGATCTTTCTGGTAATACTGAAAGCAAGACAAGCAGA GTGCACACTTCACAAGGCACGAGTCCCCGAGGGACCAGGGGAGGGCTGGGGTGCCATCCC CGGTGACAGATGGATGGACCTTTCATCTGAGAGAAAGGAGACGACACGTTGGTGAATCAA CTTCAAACCCAGGAGTGCCTGCGAAGCCATCACAAAGGGGAAAACACACACACACCAGCA AGAAGATCAAAAAGACCAGCAGGGCGCGAATCGTTGCAAACTCCCGGCTTGGGCAGCTCC TCACCTGACCCAGAAGCAACATGTCCCTGAAGCTGCCGAGAAACTGGGACTTCAGCCTGC GAGGGGAGGCTGGGAAAATAGCTCGGTCAAGGAGCGTGATGACCGGTGAGCAGATGGCGG CCTTTCACCCCGCATCCAGCCCCAACCCGCTGGAAAGGCCCATCAAGATGGGCTGGCTGA AGAAGCAGAGGTCCATCGTGAAAAACTGGCAGCAGAGGTACTTCGTGCTGAGGGCGCAGC AGCTCTATTACTACAAGGACGAGGAGGACGTGAAGCCACAGGGTTACATGTATCTCCCAG GAAGTACAATCAAGGAGATTGCCACAAACCCAGAAGAAGCGGGGAAGTTTGTCTTTGAAG TCATTCCAGCCTCATGTGACCAGAGTCGCACGGGACAGGACTCCTATGTCCTCATGGCCA GCTCCCAGGCGGAAATGGAGGAGTGGGTTAAATTCCTTAGGAGAGTCGCTGGCACGCCCT GTGGAGCGGTGTTCGGCCAGCGCTTGGATGAGACCGTGGCCTATGAGCAGAAATTTGGCC CCCACCTGGTGCCCATCCTGGTGGAGAAGTGTGCCGAGTTCATCCTGGAGCATGGCCTGA ATGAAGAGGGCATCTTCCGACTGCCTGGGCAGGACAACCTGGTGAAGCAGCTGAGAGATG CTTTTGACGCGGGGGAGCGGCCCAACTTTGACAGAGATACAGATGTGCACACAGTGGCCT CCCTGCTGAAGCTCTACCTCCGAGACCTCCCAGAACCAGTGGTTCCCTGGAGCCAGTATG AGGGGTTCCTGCTGTGTGGGCAGCTCATGAATGCAGATGAGGCAAAGGCTCAGCAGGAGC TGGTGAAGCAGCTCTCCATCCTTCCTCGAGACAACTATAGCCTCCTGAGCTACATCTGCA GGTTCCTCCACGAAATCCAGCTGAACTGTGGAGTTAACAAGATGAGTGTGGACAATCTGG CTACTGTAATTGGTGTGAATCTCATCAGGTCAAAAGTCGAAGACCCTGCCGTGATCATGA GAGGGACTCCTCAGATCCAAAGAGTGATGACCATGATGATCAGAGACCATGAAGTCCTCT TCCCCAAGTCTAAGGATGCACCCTTATCCCCTCCTGCCCCCAAAAACGACCCCAAGAAAC CTCCAGTGGCACGAAGCTCTGTGGGCTGGGATGCCTCTGAGGACCCTCCAATTTCTAGGA CAGACAGCATTAATAACATGGCCAGCGACTCCGACGCAACCAGTCCTACTGGACAACGGC CAAATGATGGGTGTCTAGAAGACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 70 entry(ies) | More info |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
| 440-642, gnl|bosTau2|chr28 (29481850-29482052) | |
| 440-642, gnl|canFam2|chr10 (70790767-70790964) | |
| 440-642, gnl|canFam2|chr28 (3524277-3524514) | |
| 440-642, gnl|danRer3|chr21 (33410699-33410934) | |
| 440-642, gnl|danRer3|chr5 (12087618-12087803) | |
| 440-642, gnl|dasNov1|scaffold_84761 (3743-3547) | |
| 440-642, gnl|dasNov1|scaffold_84761 (3557-3794) | |
| 440-642, gnl|echTel1|scaffold_244419 (8732-8529) | |
| 440-642, gnl|fr1|chrUn (108057021-108057208) | |
| 440-642, gnl|fr1|chrUn (16375466-16375704) | |
| 440-642, gnl|galGal2|chr22 (300998-300805) | |
| 440-642, gnl|galGal2|chr6 (17570790-17571016) | |
| 440-642, gnl|hg17|chr10 (49461001-49461238) | |
| 440-642, gnl|Hg17|chr10 (49461205-49461003) | |
| 440-642, gnl|hg17|chr2 (68914022-68914224) | |
| 440-642, gnl|loxAfr1|scaffold_15297 (25584-25786) | |
| 440-642, gnl|loxAfr1|scaffold_54431 (8927-9163) | |
| 440-642, gnl|mm7|chr14 (30702956-30702721) | |
| 440-642, gnl|Mm7|chr14 (30702750-30702952) | |
| 440-642, gnl|mm7|chr6 (87571189-87570988) | |
| 440-642, gnl|monDom2|scaffold_1 (95318147-95318341) | |
| 440-642, gnl|monDom2|scaffold_14 (19666686-19666909) | |
| 440-642, gnl|oryCun1|scaffold_157378 (15062-15299) | |
| 440-642, gnl|oryCun1|scaffold_193441 (12900-13101) | |
| 440-642, gnl|panTro1|chr12 (71148317-71148518) | |
| 440-642, gnl|panTro1|chr8_random (32268157-32268394) | |
| 440-642, gnl|rheMac2|chr13 (69001776-69001978) | |
| 440-642, gnl|rheMac2|chr9 (48032423-48032186) | |
| 440-642, gnl|rn3|chr16 (8811076-8810839) | |
| 440-642, gnl|rn3|chr4 (121909545-121909344) | |
| 440-642, gnl|tetNig1|chr12 (11387571-11387758) | |
| 440-642, gnl|xenTro1|scaffold_110 (884815-885023) | |
| 440-642, gnl|xenTro1|scaffold_696 (115068-114848) | |
| 845-1086, gnl|bosTau2|chr11 (47582640-47582880) | |
| 845-1086, gnl|canFam2|chr28 (3429059-3428838) | |
| 845-1086, gnl|danRer3|chr5 (12096919-12097143) | |
| 845-1086, gnl|dasNov1|scaffold_283928 (1034-1255) | |
| 845-1086, gnl|echTel1|scaffold_270273 (375-154) | |
| 845-1086, gnl|fr1|chrUn (108058528-108058752) | |
| 845-1086, gnl|galGal2|chr22 (296167-295948) | |
| 845-1086, gnl|hg17|chr2 (68946045-68946266) | |
| 845-1086, gnl|Hg17|chr2 (68946054-68946308) | |
| 845-1086, gnl|loxAfr1|scaffold_15297 (58998-59219) | |
| 845-1086, gnl|mm7|chr6 (87551456-87551235) | |
| 845-1086, gnl|Mm7|chr6 (87551445-87551202) | |
| 845-1086, gnl|monDom2|scaffold_1 (95346371-95346592) | |
| 845-1086, gnl|oryCun1|scaffold_203292 (15795-16016) | |
| 845-1086, gnl|panTro1|chr12 (71180283-71180504) | |
| 845-1086, gnl|rheMac2|chr13 (69034050-69034271) | |
| 845-1086, gnl|rn3|chr4 (121881201-121880980) | |
| 845-1086, gnl|tetNig1|chr12 (11388933-11389157) | |
| 845-1086, gnl|xenTro1|scaffold_110 (898481-898699) | |
| 1382-1581, gnl|bosTau2|chr11 (47592684-47592883) | |
| 1382-1581, gnl|canFam2|chr10 (70833334-70833525) | |
| 1382-1581, gnl|danRer3|chr5 (12103976-12104140) | |
| 1382-1581, gnl|echTel1|scaffold_292834 (9005-8816) | |
| 1382-1581, gnl|fr1|chrUn (108059950-108060121) | |
| 1382-1581, gnl|galGal2|chr22 (292452-292276) | |
| 1382-1581, gnl|hg17|chr2 (68957883-68958071) | |
| 1382-1581, gnl|Hg17|chr2 (68957904-68958103) | |
| 1382-1581, gnl|loxAfr1|scaffold_19598 (32941-33129) | |
| 1382-1581, gnl|mm7|chr6 (87540819-87540627) | |
| 1382-1581, gnl|Mm7|chr6 (87540792-87540593) | |
| 1382-1581, gnl|monDom2|scaffold_1 (95361215-95361393) | |
| 1382-1581, gnl|oryCun1|scaffold_210325 (50817-50635) | |
| 1382-1581, gnl|panTro1|chr12 (71192079-71192267) | |
| 1382-1581, gnl|rheMac2|chr13 (69046396-69046584) | |
| 1382-1581, gnl|rn3|chr4 (121872034-121871842) | |
| 1382-1581, gnl|tetNig1|chr12 (11390342-11390523) | |
| 1382-1581, gnl|xenTro1|scaffold_110 (901585-901751) |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 440-642, gnl|bosTau2|chr28 (29481850-29482052) | |
| 440-642, gnl|canFam2|chr10 (70790767-70790964) | |
| 440-642, gnl|canFam2|chr28 (3524277-3524514) | |
| 440-642, gnl|danRer3|chr21 (33410699-33410934) | |
| 440-642, gnl|danRer3|chr5 (12087618-12087803) | |
| 440-642, gnl|dasNov1|scaffold_84761 (3743-3547) | |
| 440-642, gnl|dasNov1|scaffold_84761 (3557-3794) | |
| 440-642, gnl|echTel1|scaffold_244419 (8732-8529) | |
| 440-642, gnl|fr1|chrUn (108057021-108057208) | |
| 440-642, gnl|fr1|chrUn (16375466-16375704) | |
| 440-642, gnl|galGal2|chr22 (300998-300805) | |
| 440-642, gnl|galGal2|chr6 (17570790-17571016) | |
| 440-642, gnl|hg17|chr10 (49461001-49461238) | |
| 440-642, gnl|Hg17|chr10 (49461205-49461003) | |
| 440-642, gnl|hg17|chr2 (68914022-68914224) | |
| 440-642, gnl|loxAfr1|scaffold_15297 (25584-25786) | |
| 440-642, gnl|loxAfr1|scaffold_54431 (8927-9163) | |
| 440-642, gnl|mm7|chr14 (30702956-30702721) | |
| 440-642, gnl|Mm7|chr14 (30702750-30702952) | |
| 440-642, gnl|mm7|chr6 (87571189-87570988) | |
| 440-642, gnl|monDom2|scaffold_1 (95318147-95318341) | |
| 440-642, gnl|monDom2|scaffold_14 (19666686-19666909) | |
| 440-642, gnl|oryCun1|scaffold_157378 (15062-15299) | |
| 440-642, gnl|oryCun1|scaffold_193441 (12900-13101) | |
| 440-642, gnl|panTro1|chr12 (71148317-71148518) | |
| 440-642, gnl|panTro1|chr8_random (32268157-32268394) | |
| 440-642, gnl|rheMac2|chr13 (69001776-69001978) | |
| 440-642, gnl|rheMac2|chr9 (48032423-48032186) | |
| 440-642, gnl|rn3|chr16 (8811076-8810839) | |
| 440-642, gnl|rn3|chr4 (121909545-121909344) | |
| 440-642, gnl|tetNig1|chr12 (11387571-11387758) | |
| 440-642, gnl|xenTro1|scaffold_110 (884815-885023) | |
| 440-642, gnl|xenTro1|scaffold_696 (115068-114848) | |
| 845-1086, gnl|bosTau2|chr11 (47582640-47582880) | |
| 845-1086, gnl|canFam2|chr28 (3429059-3428838) | |
| 845-1086, gnl|danRer3|chr5 (12096919-12097143) | |
| 845-1086, gnl|dasNov1|scaffold_283928 (1034-1255) | |
| 845-1086, gnl|echTel1|scaffold_270273 (375-154) | |
| 845-1086, gnl|fr1|chrUn (108058528-108058752) | |
| 845-1086, gnl|galGal2|chr22 (296167-295948) | |
| 845-1086, gnl|hg17|chr2 (68946045-68946266) | |
| 845-1086, gnl|Hg17|chr2 (68946054-68946308) | |
| 845-1086, gnl|loxAfr1|scaffold_15297 (58998-59219) | |
| 845-1086, gnl|mm7|chr6 (87551456-87551235) | |
| 845-1086, gnl|Mm7|chr6 (87551445-87551202) | |
| 845-1086, gnl|monDom2|scaffold_1 (95346371-95346592) | |
| 845-1086, gnl|oryCun1|scaffold_203292 (15795-16016) | |
| 845-1086, gnl|panTro1|chr12 (71180283-71180504) | |
| 845-1086, gnl|rheMac2|chr13 (69034050-69034271) | |
| 845-1086, gnl|rn3|chr4 (121881201-121880980) | |
| 845-1086, gnl|tetNig1|chr12 (11388933-11389157) | |
| 845-1086, gnl|xenTro1|scaffold_110 (898481-898699) | |
| 1382-1581, gnl|bosTau2|chr11 (47592684-47592883) | |
| 1382-1581, gnl|canFam2|chr10 (70833334-70833525) | |
| 1382-1581, gnl|danRer3|chr5 (12103976-12104140) | |
| 1382-1581, gnl|echTel1|scaffold_292834 (9005-8816) | |
| 1382-1581, gnl|fr1|chrUn (108059950-108060121) | |
| 1382-1581, gnl|galGal2|chr22 (292452-292276) | |
| 1382-1581, gnl|hg17|chr2 (68957883-68958071) | |
| 1382-1581, gnl|Hg17|chr2 (68957904-68958103) | |
| 1382-1581, gnl|loxAfr1|scaffold_19598 (32941-33129) | |
| 1382-1581, gnl|mm7|chr6 (87540819-87540627) | |
| 1382-1581, gnl|Mm7|chr6 (87540792-87540593) | |
| 1382-1581, gnl|monDom2|scaffold_1 (95361215-95361393) | |
| 1382-1581, gnl|oryCun1|scaffold_210325 (50817-50635) | |
| 1382-1581, gnl|panTro1|chr12 (71192079-71192267) | |
| 1382-1581, gnl|rheMac2|chr13 (69046396-69046584) | |
| 1382-1581, gnl|rn3|chr4 (121872034-121871842) | |
| 1382-1581, gnl|tetNig1|chr12 (11390342-11390523) | |
| 1382-1581, gnl|xenTro1|scaffold_110 (901585-901751) |