Ss1.1-Liv1-LVR010062H11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTCGGGATCTGGAGCCGAGAGCCTGCAGTCGCAGGATTCCCAGGAGCCATGTTGTCTCA AGTCCTGCTGGTGTCCGCTCCAGGGAAAGTCATCCTTCATGGAGAGCATTCTGTGGTCCA TGGCAAGGTAGCACTGGCTGTGGCCTTGAACTTGAGAACATTCCTCCGGCTTCAGCCCCA CAACAGTGGGAAAGTGAGCCTCAGGTTACCAAACATTGGCATCCAGCAGACCTGGGATGT GGCCAGGCTTCAGCTGCTGGACACCAGCTTTCTGGAGCAAGGCGACCTCACAGAGCAAGT GGAGAAGCTGAAGGAGGTGGCGGGCTTCTCCAAGGACTCCACCAACCACGACTGCCTGGC GGTGCCGGCCTTCCTTTACTTGTACCTGACCATCTGCCGGAGTCAGAGGACCCTGCCCAG CCTGGACATTGCCGTGTGGTCAGAGCTGCCCACTGGGGCCGGCCTGGGCTCCAGTGCCGC CTACTCCGTGTGTCTGGCAGCCGCACTCCTGACCGCATGCGAGGAGATCCCAAACCCGCT GAAGGACGGGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTCGGGATCTGGAGCCGAGAGCCTGCAGTCGCAGGATTCCCAGGAGCCATGTTGTCTCA AGTCCTGCTGGTGTCCGCTCCAGGGAAAGTCATCCTTCATGGAGAGCATTCTGTGGTCCA TGGCAAGGTAGCACTGGCTGTGGCCTTGAACTTGAGAACATTCCTCCGGCTTCAGCCCCA CAACAGTGGGAAAGTGAGCCTCAGGTTACCAAACATTGGCATCCAGCAGACCTGGGATGT GGCCAGGCTTCAGCTGCTGGACACCAGCTTTCTGGAGCAAGGCGACCTCACAGAGCAAGT GGAGAAGCTGAAGGAGGTGGCGGGCTTCTCCAAGGACTCCACCAACCACGACTGCCTGGC GGTGCCGGCCTTCCTTTACTTGTACCTGACCATCTGCCGGAGTCAGAGGACCCTGCCCAG CCTGGACATTGCCGTGTGGTCAGAGCTGCCCACTGGGGCCGGCCTGGGCTCCAGTGCCGC CTACTCCGTGTGTCTGGCAGCCGCACTCCTGACCGCATGCGAGGAGATCCCAAACCCGCT GAAGGACGGGGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 156-275, - strand, RNAz p=0.530433 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 156-275, - strand, RNAz p=0.530433 |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 126-275, gnl|bosTau2|chr17 (35669390-35669539) | |
| 126-275, gnl|canFam2|chr26 (20542371-20542254) | |
| 126-275, gnl|danRer3|chr5 (9672297-9672400) | |
| 126-275, gnl|dasNov1|scaffold_39718 (3240-3357) | |
| 126-275, gnl|fr1|chrUn (1696814-1696937) | |
| 126-275, gnl|hg17|chr12 (108476500-108476617) | |
| 126-275, gnl|Hg17|chr12 (108476521-108476670) | |
| 126-275, gnl|mm7|chr5 (113667912-113668029) | |
| 126-275, gnl|Mm7|chr5 (113667933-113668082) | |
| 126-275, gnl|oryCun1|scaffold_203691 (87138-87242) | |
| 126-275, gnl|panTro1|chr10_random (2937157-2937040) | |
| 126-275, gnl|rheMac2|chr11 (110578883-110579000) | |
| 126-275, gnl|tetNig1|chr12 (6292276-6292376) | |
| 403-552, gnl|bosTau2|chr17 (35672054-35672201) | |
| 403-552, gnl|canFam2|chr26 (20537249-20537083) | |
| 403-552, gnl|danRer3|chr5 (9672950-9673113) | |
| 403-552, gnl|dasNov1|scaffold_39718 (7895-8061) | |
| 403-552, gnl|fr1|chrUn (1698114-1698280) | |
| 403-552, gnl|hg17|chr12 (108481915-108482081) | |
| 403-552, gnl|Hg17|chr12 (108481916-108482063) | |
| 403-552, gnl|loxAfr1|scaffold_100755 (4677-4843) | |
| 403-552, gnl|mm7|chr5 (113672477-113672643) | |
| 403-552, gnl|Mm7|chr5 (113672478-113672625) | |
| 403-552, gnl|oryCun1|scaffold_203691 (94372-94538) | |
| 403-552, gnl|panTro1|chr10_random (2931736-2931570) | |
| 403-552, gnl|rheMac2|chr11 (110584717-110584883) | |
| 403-552, gnl|tetNig1|chr12 (6293203-6293366) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 126-275, gnl|bosTau2|chr17 (35669390-35669539) | |
| 126-275, gnl|canFam2|chr26 (20542371-20542254) | |
| 126-275, gnl|danRer3|chr5 (9672297-9672400) | |
| 126-275, gnl|dasNov1|scaffold_39718 (3240-3357) | |
| 126-275, gnl|fr1|chrUn (1696814-1696937) | |
| 126-275, gnl|hg17|chr12 (108476500-108476617) | |
| 126-275, gnl|Hg17|chr12 (108476521-108476670) | |
| 126-275, gnl|mm7|chr5 (113667912-113668029) | |
| 126-275, gnl|Mm7|chr5 (113667933-113668082) | |
| 126-275, gnl|oryCun1|scaffold_203691 (87138-87242) | |
| 126-275, gnl|panTro1|chr10_random (2937157-2937040) | |
| 126-275, gnl|rheMac2|chr11 (110578883-110579000) | |
| 126-275, gnl|tetNig1|chr12 (6292276-6292376) | |
| 403-552, gnl|bosTau2|chr17 (35672054-35672201) | |
| 403-552, gnl|canFam2|chr26 (20537249-20537083) | |
| 403-552, gnl|danRer3|chr5 (9672950-9673113) | |
| 403-552, gnl|dasNov1|scaffold_39718 (7895-8061) | |
| 403-552, gnl|fr1|chrUn (1698114-1698280) | |
| 403-552, gnl|hg17|chr12 (108481915-108482081) | |
| 403-552, gnl|Hg17|chr12 (108481916-108482063) | |
| 403-552, gnl|loxAfr1|scaffold_100755 (4677-4843) | |
| 403-552, gnl|mm7|chr5 (113672477-113672643) | |
| 403-552, gnl|Mm7|chr5 (113672478-113672625) | |
| 403-552, gnl|oryCun1|scaffold_203691 (94372-94538) | |
| 403-552, gnl|panTro1|chr10_random (2931736-2931570) | |
| 403-552, gnl|rheMac2|chr11 (110584717-110584883) | |
| 403-552, gnl|tetNig1|chr12 (6293203-6293366) |