Non-Coding RNA Search

Ss1.1-Liv1-LVR010068E12.5

Sequence:


               
               TAATGAGATTAGCAATTAAAAAGCCGGCGAGCGGCCGCGGCAGAGGCGCGGGGCCATCCC
CAGGCCGAAGCGGGCGGGTCGGCGCTCCCGGCGGACGCGCACCCACCCCGCCGCGCGCCG
CACTCCGAGGCCATGGACAAAGCGCGGCCGCTGTGGGACACCCCGCTGCAGTTCGTGTTC
GCCTGCATCTCGTACGCCGTGGGCCTGGGCAATGTGTGGCGCTTCCCCTACCTGTGCCAG
ATGTACGGCGGAGGTAGCTTCCTGGTGCCCTACCTCATCATGCTCATTGTGGAGGGCATG
CCGCTCCTGTACCTGGAACTGGCAGTGGGGCAGCGCATGCGCCAGGGCAGCATTGGTGCC
TGGAGGACCATCAGCCCCTACCTGGGTGGCGTCGGTGTGGCCAGTGTGGTGGTGTCCTTC
TTCCTCTCCATGTACTACAATGTCGTCAATGCCTGGGCCTTCTGGTACCTCTTCCACTCC
TTCCAGGATCCCTTGCCGTGGTCTGTCTGCCCACTGAATAGCAACCACACGGGCTATGAC
AAGGAGTGCGAGAAGGCTTCCTCCACGCAGTACTTTTGGTACCGCAAGACCCTCAACATC
TCACCATCCATCCAGGAGAGTGGGCCGGTGCAGTGGGAGCCAGCGCTCTGCCTCATCCTG
GCTTGGCTGCTGGTGTACCTGTGCATCCTGCGGGGCACCGAGTCCACAGGCAAGGTGGTG
TACTTCACGGCATTGCTGCCCTACTGCGTGCTCATCATCTACCTGGTCAGGGGCCTCACC
CTCCACGGAGCCACCAATGGCCTGGTGTACATGTTCACTCCCAAGGTGGAACAGCTGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATGAGATTAGCAATTAAAAAGCCGGCGAGCGGCCGCGGCAGAGGCGCGGGGCCATCCC
CAGGCCGAAGCGGGCGGGTCGGCGCTCCCGGCGGACGCGCACCCACCCCGCCGCGCGCCG
CACTCCGAGGCCATGGACAAAGCGCGGCCGCTGTGGGACACCCCGCTGCAGTTCGTGTTC
GCCTGCATCTCGTACGCCGTGGGCCTGGGCAATGTGTGGCGCTTCCCCTACCTGTGCCAG
ATGTACGGCGGAGGTAGCTTCCTGGTGCCCTACCTCATCATGCTCATTGTGGAGGGCATG
CCGCTCCTGTACCTGGAACTGGCAGTGGGGCAGCGCATGCGCCAGGGCAGCATTGGTGCC
TGGAGGACCATCAGCCCCTACCTGGGTGGCGTCGGTGTGGCCAGTGTGGTGGTGTCCTTC
TTCCTCTCCATGTACTACAATGTCGTCAATGCCTGGGCCTTCTGGTACCTCTTCCACTCC
TTCCAGGATCCCTTGCCGTGGTCTGTCTGCCCACTGAATAGCAACCACACGGGCTATGAC
AAGGAGTGCGAGAAGGCTTCCTCCACGCAGTACTTTTGGTACCGCAAGACCCTCAACATC
TCACCATCCATCCAGGAGAGTGGGCCGGTGCAGTGGGAGCCAGCGCTCTGCCTCATCCTG
GCTTGGCTGCTGGTGTACCTGTGCATCCTGCGGGGCACCGAGTCCACAGGCAAGGTGGTG
TACTTCACGGCATTGCTGCCCTACTGCGTGCTCATCATCTACCTGGTCAGGGGCCTCACC
CTCCACGGAGCCACCAATGGCCTGGTGTACATGTTCACTCCCAAGGTGGAACAGCTGGCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|3347918|gb|AAC27755.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3347918|gb|AAC27755.1|

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

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               1-270, gnl|bosTau2|chr9 (18398676-18398938)
               

               
               1-270, gnl|Hg17|chr3 (45813076-45812776)
               

               
               1-270, gnl|Mm7|chr9 (123395118-123394892)
               


               
               143-257, gnl|bosTau2|chr20 (42706472-42706358)
               

               
               143-257, gnl|Hg17|chr5 (1254857-1254971)
               

               
               143-257, gnl|Mm7|chr13 (70632782-70632668)
               


               
               484-716, gnl|bosTau2|chr9 (18416379-18416611)
               

               
               484-716, gnl|Hg17|chr3 (45792487-45792255)
               

               
               484-716, gnl|Mm7|chr9 (123376857-123376625)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-270, gnl|bosTau2|chr9 (18398676-18398938)
               

               
               1-270, gnl|Hg17|chr3 (45813076-45812776)
               

               
               1-270, gnl|Mm7|chr9 (123395118-123394892)
               


               
               143-257, gnl|bosTau2|chr20 (42706472-42706358)
               

               
               143-257, gnl|Hg17|chr5 (1254857-1254971)
               

               
               143-257, gnl|Mm7|chr13 (70632782-70632668)
               


               
               484-716, gnl|bosTau2|chr9 (18416379-18416611)
               

               
               484-716, gnl|Hg17|chr3 (45792487-45792255)
               

               
               484-716, gnl|Mm7|chr9 (123376857-123376625)

	1-270, gnl\|bosTau2\|chr9 (18398676-18398938)
	1-270, gnl\|Hg17\|chr3 (45813076-45812776)
	1-270, gnl\|Mm7\|chr9 (123395118-123394892)

	143-257, gnl\|bosTau2\|chr20 (42706472-42706358)
	143-257, gnl\|Hg17\|chr5 (1254857-1254971)
	143-257, gnl\|Mm7\|chr13 (70632782-70632668)

	484-716, gnl\|bosTau2\|chr9 (18416379-18416611)
	484-716, gnl\|Hg17\|chr3 (45792487-45792255)
	484-716, gnl\|Mm7\|chr9 (123376857-123376625)