Non-Coding RNA Search

Ss1.1-Liv1-LVR010072G09.5

Sequence:


               
               AACAGGTGCCTCCGGAGCAGGAAGCTCGCGCCGCCGCTCTGCTCCCCGGGGCGCGTCCAG
GACCCGCCGCGCCAGGCGCGCCATCCCCGGACCCGGCGTGCGTCCCCACGAGGACAGTGA
CCCCGCCGCTCGAGCCGCCCCTCCGCCCCGCTTCCTGCCACCGTCGCCACCCTCGGCGAG
GGGCCCAGGAGAGAGCCGAGTCTGCCCTCGCCCCCGGCCCGCCGCCCTCTCGCCGCTTTG
CACGCCATGGACGCCCCGGAGCCGCAGCCGGACCCCGACGGCGGGGACGCCCCGGGCCAC
GAGCCTGGAGGCGGTTCCCAAGACGAGTTCGACTTCTCCATCCTCTTCGATTATGACTAT
TTGAATCCTATCGAAGGTCGGTGGAGGCTCCCCCCGGCCTGGCCCTCGAGCCTGGGCTGG
GGCTTGGGCCTGAGCAGTGGGCAGAGGGCCCTCTTTTGCTCCAGATGTCACACTTCCTGG
GGGACCTGAAGAGGGGCTGCCTCTTCAGCCAGGTGGAGGGAAGGCGCGAGGCGGCAGCGA
CTGCAGCCACCTTTAGGGGGCGCTAGGCTCATTCCGCCCGTAGGGCGTCAGTTTCCAGTT
ACTTCTGCCTCAGGGTCGGTGGTAGCAAAGCAGAGGGTGGCCGGGGGTCTCTGCTGGCCT
CTTGCGTGCTGCTGGGTCCTCTGAGGGCAGCGAAAGCTGTGAGTTTGCCTTTGGAGGGAG
GCGGTGAGGAAGCTAAAGAATGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACAGGTGCCTCCGGAGCAGGAAGCTCGCGCCGCCGCTCTGCTCCCCGGGGCGCGTCCAG
GACCCGCCGCGCCAGGCGCGCCATCCCCGGACCCGGCGTGCGTCCCCACGAGGACAGTGA
CCCCGCCGCTCGAGCCGCCCCTCCGCCCCGCTTCCTGCCACCGTCGCCACCCTCGGCGAG
GGGCCCAGGAGAGAGCCGAGTCTGCCCTCGCCCCCGGCCCGCCGCCCTCTCGCCGCTTTG
CACGCCATGGACGCCCCGGAGCCGCAGCCGGACCCCGACGGCGGGGACGCCCCGGGCCAC
GAGCCTGGAGGCGGTTCCCAAGACGAGTTCGACTTCTCCATCCTCTTCGATTATGACTAT
TTGAATCCTATCGAAGGTCGGTGGAGGCTCCCCCCGGCCTGGCCCTCGAGCCTGGGCTGG
GGCTTGGGCCTGAGCAGTGGGCAGAGGGCCCTCTTTTGCTCCAGATGTCACACTTCCTGG
GGGACCTGAAGAGGGGCTGCCTCTTCAGCCAGGTGGAGGGAAGGCGCGAGGCGGCAGCGA
CTGCAGCCACCTTTAGGGGGCGCTAGGCTCATTCCGCCCGTAGGGCGTCAGTTTCCAGTT
ACTTCTGCCTCAGGGTCGGTGGTAGCAAAGCAGAGGGTGGCCGGGGGTCTCTGCTGGCCT
CTTGCGTGCTGCTGGGTCCTCTGAGGGCAGCGAAAGCTGTGAGTTTGCCTTTGGAGGGAG
GCGGTGAGGAAGCTAAAGAATGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               323-480, - strand, RNAz p=0.974103

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               323-480, - strand, RNAz p=0.974103

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               72-743, gnl|bosTau2|chr13 (58567066-58567753)
               

               
               72-743, gnl|Hg17|chr20 (49592622-49591921)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-743, gnl|bosTau2|chr13 (58567066-58567753)
               

               
               72-743, gnl|Hg17|chr20 (49592622-49591921)

	72-743, gnl\|bosTau2\|chr13 (58567066-58567753)
	72-743, gnl\|Hg17\|chr20 (49592622-49591921)