Ss1.1-Liv1-LVR010073E03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATCCTGGGAAATAAACCGATGAGTAGGACAGGGAAGAGGAAGCACTGCCCTGATTTCAG CAGGAGTGGCAGCCTCTCGCCCAAGCGAAGTGTTCACTCCTGAGAAAAGCAAAGGATTAA GCTAATGCTCCAATCTTTAACAAGGCCGCTACTTCAGGGCTACTGATATTTTGATCAAAG CAGACCTCACCGAAGTCAGAGCCAAGACGTTACCACCAAGCAGTCCAAGAGACTCACAAG CAAAGCTGGAGGTGAGACCTGAAGAAAGCTGGGACCATGCTGACCTCATGCAATGCAATG AAACAGACTCCACTTCTGGAAATTCCACCACCAATGCAGATGAGGAAGATGAGGGTCCCC AGATCTGCCGTGTATGTGGGGACAAGGCCACTGGTTATCATTTCAATGTTATGACATGTG AAGGATGCAAGGGCTTTTTCAGGAGGGCCATCAAACGCAATGCCCGGCCCCGGTGCCTCT TCCGGAAGGGCGCCTGCGAGATCACCCGGAAGACTCGGCGGCAGTGCCAGGCCTGCCGCC TCCGCAAGTGTCTGGAAAGCGGCATGAGGAAGGAAATGATCATGTCAGATGCAGCTGTGG AGCAGAGGCGGGCCTTGATCAGGAGGAAGAAACGAGAACAGATCGGGGCTCAGCCCCCAG GAGCCAAGGGTCTCACTGAAGAGCAGCGGACAATGATCAGTGAGCTGATGAACGCTCAGA TGAAAACCTTTGACACCACCTTCACACATTTCAAGAATTTTCGGTTACCAGAGGTGCTTA GCAGTAGCCTCGAGATTCCAGAGTGTCTGCAGACTCCGTCGTCGAGGGAAGAAGCTGCCA AGTGGAGCAAGCTCAGGGAAGATCTGTGCTCAGTGAAACTCTCTCTGCAGCTAAGGGGGG AAGATGGTAGCGTCTGGAACTACNAACCCCCAGCAGACAACAGTGGGAAAGAGATCTTTT CCCTGCTGCCCCACATAGCTGACATGTCAACCTACATGTTCAAAGGCATTATCAACTTTG CAAAAGTCATCTCCTACTTCAGGGACTTGCCCATTGAGGACCAGATCTCTCTGCTGAAGG GGGCCACCTTTGGGCTGTGCCAGCTGAGATTCAACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATCCTGGGAAATAAACCGATGAGTAGGACAGGGAAGAGGAAGCACTGCCCTGATTTCAG CAGGAGTGGCAGCCTCTCGCCCAAGCGAAGTGTTCACTCCTGAGAAAAGCAAAGGATTAA GCTAATGCTCCAATCTTTAACAAGGCCGCTACTTCAGGGCTACTGATATTTTGATCAAAG CAGACCTCACCGAAGTCAGAGCCAAGACGTTACCACCAAGCAGTCCAAGAGACTCACAAG CAAAGCTGGAGGTGAGACCTGAAGAAAGCTGGGACCATGCTGACCTCATGCAATGCAATG AAACAGACTCCACTTCTGGAAATTCCACCACCAATGCAGATGAGGAAGATGAGGGTCCCC AGATCTGCCGTGTATGTGGGGACAAGGCCACTGGTTATCATTTCAATGTTATGACATGTG AAGGATGCAAGGGCTTTTTCAGGAGGGCCATCAAACGCAATGCCCGGCCCCGGTGCCTCT TCCGGAAGGGCGCCTGCGAGATCACCCGGAAGACTCGGCGGCAGTGCCAGGCCTGCCGCC TCCGCAAGTGTCTGGAAAGCGGCATGAGGAAGGAAATGATCATGTCAGATGCAGCTGTGG AGCAGAGGCGGGCCTTGATCAGGAGGAAGAAACGAGAACAGATCGGGGCTCAGCCCCCAG GAGCCAAGGGTCTCACTGAAGAGCAGCGGACAATGATCAGTGAGCTGATGAACGCTCAGA TGAAAACCTTTGACACCACCTTCACACATTTCAAGAATTTTCGGTTACCAGAGGTGCTTA GCAGTAGCCTCGAGATTCCAGAGTGTCTGCAGACTCCGTCGTCGAGGGAAGAAGCTGCCA AGTGGAGCAAGCTCAGGGAAGATCTGTGCTCAGTGAAACTCTCTCTGCAGCTAAGGGGGG AAGATGGTAGCGTCTGGAACTACNAACCCCCAGCAGACAACAGTGGGAAAGAGATCTTTT CCCTGCTGCCCCACATAGCTGACATGTCAACCTACATGTTCAAAGGCATTATCAACTTTG CAAAAGTCATCTCCTACTTCAGGGACTTGCCCATTGAGGACCAGATCTCTCTGCTGAAGG GGGCCACCTTTGGGCTGTGCCAGCTGAGATTCAACA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 807-926, + strand, RNAz p=0.650219 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 807-926, + strand, RNAz p=0.650219 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 2-175, gnl|bosTau2|chr1 (30090856-30091034) | |
| 2-175, gnl|Hg17|chr3 (120983589-120983764) | |
| 2-175, gnl|Mm7|chr16 (38000928-38000740) | |
| 222-443, gnl|bosTau2|chr1 (30112559-30112780) | |
| 222-443, gnl|Hg17|chr3 (121008764-121008985) | |
| 222-443, gnl|Mm7|chr16 (37972735-37972517) | |
| 577-767, gnl|bosTau2|chr1 (30116717-30116907) | |
| 577-767, gnl|canFam2|chr33 (26489965-26490192) | |
| 577-767, gnl|danRer3|chr9 (11484861-11485038) | |
| 577-767, gnl|dasNov1|scaffold_4646 (29905-30131) | |
| 577-767, gnl|fr1|chrUn (216851645-216851443) | |
| 577-767, gnl|hg17|chr3 (121013046-121013272) | |
| 577-767, gnl|Hg17|chr3 (121013076-121013266) | |
| 577-767, gnl|loxAfr1|scaffold_9658 (6295-6068) | |
| 577-767, gnl|mm7|chr16 (37960758-37960534) | |
| 577-767, gnl|Mm7|chr16 (37960728-37960538) | |
| 577-767, gnl|monDom2|scaffold_24 (16527898-16528130) | |
| 577-767, gnl|oryCun1|scaffold_5012 (3831-4037) | |
| 577-767, gnl|panTro1|chr2 (122735588-122735814) | |
| 577-767, gnl|rheMac2|chr2 (39844547-39844773) | |
| 577-767, gnl|rn3|chr11 (64328486-64328710) | |
| 577-767, gnl|tetNig1|chr2 (9749067-9749242) | |
| 768-1043, gnl|bosTau2|chr1 (30117790-30118062) | |
| 768-1043, gnl|Hg17|chr3 (121014226-121014498) | |
| 768-1043, gnl|Mm7|chr16 (37959900-37959628) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-175, gnl|bosTau2|chr1 (30090856-30091034) | |
| 2-175, gnl|Hg17|chr3 (120983589-120983764) | |
| 2-175, gnl|Mm7|chr16 (38000928-38000740) | |
| 222-443, gnl|bosTau2|chr1 (30112559-30112780) | |
| 222-443, gnl|Hg17|chr3 (121008764-121008985) | |
| 222-443, gnl|Mm7|chr16 (37972735-37972517) | |
| 577-767, gnl|bosTau2|chr1 (30116717-30116907) | |
| 577-767, gnl|canFam2|chr33 (26489965-26490192) | |
| 577-767, gnl|danRer3|chr9 (11484861-11485038) | |
| 577-767, gnl|dasNov1|scaffold_4646 (29905-30131) | |
| 577-767, gnl|fr1|chrUn (216851645-216851443) | |
| 577-767, gnl|hg17|chr3 (121013046-121013272) | |
| 577-767, gnl|Hg17|chr3 (121013076-121013266) | |
| 577-767, gnl|loxAfr1|scaffold_9658 (6295-6068) | |
| 577-767, gnl|mm7|chr16 (37960758-37960534) | |
| 577-767, gnl|Mm7|chr16 (37960728-37960538) | |
| 577-767, gnl|monDom2|scaffold_24 (16527898-16528130) | |
| 577-767, gnl|oryCun1|scaffold_5012 (3831-4037) | |
| 577-767, gnl|panTro1|chr2 (122735588-122735814) | |
| 577-767, gnl|rheMac2|chr2 (39844547-39844773) | |
| 577-767, gnl|rn3|chr11 (64328486-64328710) | |
| 577-767, gnl|tetNig1|chr2 (9749067-9749242) | |
| 768-1043, gnl|bosTau2|chr1 (30117790-30118062) | |
| 768-1043, gnl|Hg17|chr3 (121014226-121014498) | |
| 768-1043, gnl|Mm7|chr16 (37959900-37959628) |