Non-Coding RNA Search

Ss1.1-Liv1-LVR01D090092.5

Sequence:


               
               AGAAAATGAGTTTAGTGACATAGTTTATAAGGATCTGCTTAAAAAAATCAAACACTTTAA
CACCAGCTAGACCAATAAGTATAGATTTTTTGTTTGTTTGCATTTAGCTTCTTCAAAATA
ACTCTTACTCAAAAACTGAGAACACAAAAATAAGTGTTCTGTTAAAGCAGAAAATTAATT
AACAAAGTACAGATTTTTTGTTTCCAACTTTTGCTTATTTCTGGCTGGAAGATCCTTTCT
TCCATAATTTAATCCAACCTCTACTATGTGCTAATCAAAACAGATGTTAAAGACTCAAAC
TTCTAGTCTGGTTGGGCCTGGGTTGGTACCTCTGTTGCATTTGGTTAACTCACAGTGCTT
CCCAAAACTGATTTCCATCTTAACTCTAGGACCTCCCTATTTGAAATGTGTCCTTAAGGT
TCTTTGAAGAAACTCAAGCCGTCCTGCTTTTGAATTTTTAGGTCTTTGTGGCTCTGGTCA
CTGGTCCCTACTGTCCTTGCCCTGAATTTCTTCTTTCCTCCTTCATATTTCTTCCAATTT
TGTCATCCAATCTTAAAAAAAAAAAAAAAAAAAGCTTCCCTGTATTATTACAAAAGCAAT
TCACATTTGCTGTAGAAAACTGGGAAAGTTCTGATAAACCAAAAAAGAAAACATTGACAT
CATCCATACTATCACCACCACCATGATACATGGTTGATTACTAAATAACCTTCAGTCTTT
TTTTCTATTTACTATATGTGTGTACATTTTGTATAAATGTATGTACATATGCACAAATTC
AAATGCACACATGAATATTCCAAGGTGTAATTTATAACAAAGACGATTTCATCTTCAGTG
TTGTGTTCATCTGCTAGGACTATGTTGACAAAAACCCCAAGGCTGAATTCAGGTCCAGAA
TGAAAGTGTTCTGTGATCGATTAACACTCTTTGATGTAGGTACAGAGGGAGGAATAGCGG
TATGTGTGCCACCCATGGTATTTTCCAACCCAAATTGCTTTTATTTCTGTAGAGGTAACT
ATCAATATTCCAGGCACCAATGTCTGTTAGTCACAATCTCTACTCTTGACTTACAGCTGT
GAATGGATACTCTTTTGGAAGTCTCCCAGGACTTTCCATGTGTGCTGAAGACAGAGTAAA
ATGGTATCTTTTTGGTATGGGTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAAATGAGTTTAGTGACATAGTTTATAAGGATCTGCTTAAAAAAATCAAACACTTTAA
CACCAGCTAGACCAATAAGTATAGATTTTTTGTTTGTTTGCATTTAGCTTCTTCAAAATA
ACTCTTACTCAAAAACTGAGAACACAAAAATAAGTGTTCTGTTAAAGCAGAAAATTAATT
AACAAAGTACAGATTTTTTGTTTCCAACTTTTGCTTATTTCTGGCTGGAAGATCCTTTCT
TCCATAATTTAATCCAACCTCTACTATGTGCTAATCAAAACAGATGTTAAAGACTCAAAC
TTCTAGTCTGGTTGGGCCTGGGTTGGTACCTCTGTTGCATTTGGTTAACTCACAGTGCTT
CCCAAAACTGATTTCCATCTTAACTCTAGGACCTCCCTATTTGAAATGTGTCCTTAAGGT
TCTTTGAAGAAACTCAAGCCGTCCTGCTTTTGAATTTTTAGGTCTTTGTGGCTCTGGTCA
CTGGTCCCTACTGTCCTTGCCCTGAATTTCTTCTTTCCTCCTTCATATTTCTTCCAATTT
TGTCATCCAATCTTAAAAAAAAAAAAAAAAAAAGCTTCCCTGTATTATTACAAAAGCAAT
TCACATTTGCTGTAGAAAACTGGGAAAGTTCTGATAAACCAAAAAAGAAAACATTGACAT
CATCCATACTATCACCACCACCATGATACATGGTTGATTACTAAATAACCTTCAGTCTTT
TTTTCTATTTACTATATGTGTGTACATTTTGTATAAATGTATGTACATATGCACAAATTC
AAATGCACACATGAATATTCCAAGGTGTAATTTATAACAAAGACGATTTCATCTTCAGTG
TTGTGTTCATCTGCTAGGACTATGTTGACAAAAACCCCAAGGCTGAATTCAGGTCCAGAA
TGAAAGTGTTCTGTGATCGATTAACACTCTTTGATGTAGGTACAGAGGGAGGAATAGCGG
TATGTGTGCCACCCATGGTATTTTCCAACCCAAATTGCTTTTATTTCTGTAGAGGTAACT
ATCAATATTCCAGGCACCAATGTCTGTTAGTCACAATCTCTACTCTTGACTTACAGCTGT
GAATGGATACTCTTTTGGAAGTCTCCCAGGACTTTCCATGTGTGCTGAAGACAGAGTAAA
ATGGTATCTTTTTGGTATGGGTAA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               5-467, gnl|bosTau2|chr1 (76049662-76049200)
               

               
               5-467, gnl|Hg17|chr3 (150409151-150408671)
               

               
               5-467, gnl|Mm7|chr3 (19700750-19701250)
               


               
               514-1164, gnl|bosTau2|chr1 (76049201-76048549)
               

               
               514-1164, gnl|Hg17|chr3 (150408672-150408015)
               

               
               514-1164, gnl|Mm7|chr3 (19701249-19701881)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-467, gnl|bosTau2|chr1 (76049662-76049200)
               

               
               5-467, gnl|Hg17|chr3 (150409151-150408671)
               

               
               5-467, gnl|Mm7|chr3 (19700750-19701250)
               


               
               514-1164, gnl|bosTau2|chr1 (76049201-76048549)
               

               
               514-1164, gnl|Hg17|chr3 (150408672-150408015)
               

               
               514-1164, gnl|Mm7|chr3 (19701249-19701881)

	5-467, gnl\|bosTau2\|chr1 (76049662-76049200)
	5-467, gnl\|Hg17\|chr3 (150409151-150408671)
	5-467, gnl\|Mm7\|chr3 (19700750-19701250)

	514-1164, gnl\|bosTau2\|chr1 (76049201-76048549)
	514-1164, gnl\|Hg17\|chr3 (150408672-150408015)
	514-1164, gnl\|Mm7\|chr3 (19701249-19701881)