Ss1.1-Liv1-LVR01F010091.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTTCTGCAGCGCGGCGGCGACTTCTACCCGCGGACCAGCTAAGGCGGCGGCTGCTCCTA CAGCCTCCCGAGCCACGGGCCCTGACAAGCTCCAGCCGTTCGCCCACCACCACCCCCTCG GCGCGGCCCTCGCGCTGCCCCAGTGCCTGTCTTCAGAATGATTCCCTGCAGAGCAACGCT GTCTTTTGCCCGATGTCTGATCCGGAGAAAAGTCGTCACTCTAGACAGTCTAGAAGATTC CAAACTCTGCCGATGCTTATCCACCATGGACCTCATTGCCCTGGGGGTGGGAAGCACTCT TGGTGCTGGGGTTTACGTCCTCGCTGGGGAGGTTGCCAAGGCGGATTCTGGCCCCAGTAT CGTGGTTTCCTTCCTCATTGCTGCCCTGGCTTCCGTGATGGCAGGTCTTTGCTATGCTGA ATTTGGAGCCCGAGTTCCCAAGACTGGGTCCGCGTATTTGTACACTTACGTTACTGTCGG AGAACTGTGGGCCTTCATCACTGGCTGGAATCTCATTTTATCTTACGTGATAGGTACATC AAGTGTTGCAAGAGCATGGAGTGGCACCTTTGATGAGTAGCACTCCTGAGGCGGAGGCCT TGGGGTTTCATGGCAGGTGAGCATTAACGAGTGACAGAGCATCTTAGTGCAGCACTTAAT CTCTATGTGTTTCACTTTTCTCATTTCTAAAGTGTCTCCTTTTAATTGCAAAATTTGGTA ATTCTGCTTCTCCTCTGAATATACCTCTTAGTGTTTTGAAACCTGTTCTTTTTTTAATTT TTAAATTAAAAAAAAATTTTTTTAGGCCCACACCCATGGCACATGGAAGTTCTCAGGATA GGGGTGGAATAAAAGCCACACGTGCTGGCGGATGCCACAGCCATAGCAATTGTAGATCCG AGTGGCGTCTGCCACTTACACCGATGCTCACCGTAACGTTGGATCCTTTACCCACTGAGT ------------------------------------------------------------ ------------TGAAAACTTAAAAAAATGATAGTTTGTTGTTGTTGTTGTTGTTGTTGC TGTTGTTTGGGTTTTTTTTGTCTTTTTAGGCGGTCC------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------TGGAAGCTCCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTTCTGCAGCGCGGCGGCGACTTCTACCCGCGGACCAGCTAAGGCGGCGGCTGCTCCTA CAGCCTCCCGAGCCACGGGCCCTGACAAGCTCCAGCCGTTCGCCCACCACCACCCCCTCG GCGCGGCCCTCGCGCTGCCCCAGTGCCTGTCTTCAGAATGATTCCCTGCAGAGCAACGCT GTCTTTTGCCCGATGTCTGATCCGGAGAAAAGTCGTCACTCTAGACAGTCTAGAAGATTC CAAACTCTGCCGATGCTTATCCACCATGGACCTCATTGCCCTGGGGGTGGGAAGCACTCT TGGTGCTGGGGTTTACGTCCTCGCTGGGGAGGTTGCCAAGGCGGATTCTGGCCCCAGTAT CGTGGTTTCCTTCCTCATTGCTGCCCTGGCTTCCGTGATGGCAGGTCTTTGCTATGCTGA ATTTGGAGCCCGAGTTCCCAAGACTGGGTCCGCGTATTTGTACACTTACGTTACTGTCGG AGAACTGTGGGCCTTCATCACTGGCTGGAATCTCATTTTATCTTACGTGATAGGTACATC AAGTGTTGCAAGAGCATGGAGTGGCACCTTTGATGAGTAGCACTCCTGAGGCGGAGGCCT TGGGGTTTCATGGCAGGTGAGCATTAACGAGTGACAGAGCATCTTAGTGCAGCACTTAAT CTCTATGTGTTTCACTTTTCTCATTTCTAAAGTGTCTCCTTTTAATTGCAAAATTTGGTA ATTCTGCTTCTCCTCTGAATATACCTCTTAGTGTTTTGAAACCTGTTCTTTTTTTAATTT TTAAATTAAAAAAAAATTTTTTTAGGCCCACACCCATGGCACATGGAAGTTCTCAGGATA GGGGTGGAATAAAAGCCACACGTGCTGGCGGATGCCACAGCCATAGCAATTGTAGATCCG AGTGGCGTCTGCCACTTACACCGATGCTCACCGTAACGTTGGATCCTTTACCCACTGAGT ------------------------------------------------------------ ------------TGAAAACTTAAAAAAATGATAGTTTGTTGTTGTTGTTGTTGTTGTTGC TGTTGTTTGGGTTTTTTTTGTCTTTTTAGGCGGTCC------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------TGGAAGCTCCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 150-767, gnl|bosTau2|chr27 (11545204-11544590) | |
| 150-767, gnl|Hg17|chr8 (17445213-17446117) | |
| 150-767, gnl|Mm7|chr8 (39682632-39683249) | |
| 251-536, gnl|bosTau2|chr12 (15590940-15591225) | |
| 251-536, gnl|canFam2|chr25 (13326203-13325881) | |
| 251-536, gnl|danRer3|chr15 (20401051-20401371) | |
| 251-536, gnl|dasNov1|scaffold_79661 (175-497) | |
| 251-536, gnl|echTel1|scaffold_222066 (11124-11450) | |
| 251-536, gnl|fr1|chrUn (204860664-204861058) | |
| 251-536, gnl|galGal2|chr1 (167474322-167474000) | |
| 251-536, gnl|hg17|chr13 (29007950-29008272) | |
| 251-536, gnl|Hg17|chr13 (29008238-29007953) | |
| 251-536, gnl|loxAfr1|scaffold_66584 (16457-16135) | |
| 251-536, gnl|mm7|chr5 (147246769-147247091) | |
| 251-536, gnl|Mm7|chr5 (147247057-147246772) | |
| 251-536, gnl|monDom2|scaffold_15 (38929275-38929597) | |
| 251-536, gnl|oryCun1|scaffold_205624 (163226-163548) | |
| 251-536, gnl|panTro1|chr14 (28204862-28205184) | |
| 251-536, gnl|rheMac2|chr17 (9075105-9075427) | |
| 251-536, gnl|rn3|chr12 (7260845-7260523) | |
| 251-536, gnl|tetNig1|chr7 (3270898-3271307) | |
| 251-536, gnl|xenTro1|scaffold_978 (218368-218046) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 150-767, gnl|bosTau2|chr27 (11545204-11544590) | |
| 150-767, gnl|Hg17|chr8 (17445213-17446117) | |
| 150-767, gnl|Mm7|chr8 (39682632-39683249) | |
| 251-536, gnl|bosTau2|chr12 (15590940-15591225) | |
| 251-536, gnl|canFam2|chr25 (13326203-13325881) | |
| 251-536, gnl|danRer3|chr15 (20401051-20401371) | |
| 251-536, gnl|dasNov1|scaffold_79661 (175-497) | |
| 251-536, gnl|echTel1|scaffold_222066 (11124-11450) | |
| 251-536, gnl|fr1|chrUn (204860664-204861058) | |
| 251-536, gnl|galGal2|chr1 (167474322-167474000) | |
| 251-536, gnl|hg17|chr13 (29007950-29008272) | |
| 251-536, gnl|Hg17|chr13 (29008238-29007953) | |
| 251-536, gnl|loxAfr1|scaffold_66584 (16457-16135) | |
| 251-536, gnl|mm7|chr5 (147246769-147247091) | |
| 251-536, gnl|Mm7|chr5 (147247057-147246772) | |
| 251-536, gnl|monDom2|scaffold_15 (38929275-38929597) | |
| 251-536, gnl|oryCun1|scaffold_205624 (163226-163548) | |
| 251-536, gnl|panTro1|chr14 (28204862-28205184) | |
| 251-536, gnl|rheMac2|chr17 (9075105-9075427) | |
| 251-536, gnl|rn3|chr12 (7260845-7260523) | |
| 251-536, gnl|tetNig1|chr7 (3270898-3271307) | |
| 251-536, gnl|xenTro1|scaffold_978 (218368-218046) |