Non-Coding RNA Search

Ss1.1-Liv1-LVR01G010085.5

Sequence:


               
               CATAGTCAGTTGTAAGAGAGGAGCATGGAGACAGTGGTAAGAACTGCGTCCAGGCTCTTG
GTCTGGGTGGCCTGTGTGCTTGTGGCCCTCTCTGCTGCAGTCACTGGGCGAGAGGCCACT
CAACCTGAAGTCGACACCACCCTGGGCCGCGTGCGAGGCCGGCAGGTGGGCGTGAAGGGC
ACTGACCGCCTTGTGAATGTCTTCCTGGGCATCCCGTTTGCCCAGCCACCCCTGGGGCCT
GGCCGGTTCTCAGCCCCACGCCCAGCGCAGTCCTGGGAGGGTGTGCGGGATGCCAGCACA
GCCCCTGCAATGTGCCCGCAGGATCTGGAGAGGATGAACAACGCCAGATTTGTGCTGGAT
GGAAAGCACCAGATCTTCCCAGTTTCAGAGGACTGCCTGGTCCTCAACATCTACAGCCCA
GCTGAGGCCACGACGGGGGCCGGGAGGCCGGTCATGGTGTGGTTCCATGGAGGCTCTTTG
GTGGTTGGTGCCGCCACCTCCCACGACGGATCTGCCCTGGCCGCCTATGGGGATGTGGTA
GTGGTGACAGTCCAGTACCGCCTGGGGCTCCTTGGCTTCTTCAGCACTGGGGACAAGCAC
GCGCCTGGCAACTGGGGCTTCCTTGATGCAGTGGCTGCTCTCCGCTGGGTGCAAGAGAAC
ATCAGCCCCTTTGGGGGTGACTTCAACTCTGTCACCGTCTTTGGTAGCTCTGCTGGTGCA
AGCATCGTCTCTGCTCTGGTCCTGTCCCCGCTGGCTGCAGGGCTGTTCCATAGAGCTATA
GCAGAGAGTGGAGTCATCACCCTTCCGGGGTTGCTGGATTCTAACCCCTGGCCCCTGGCT
CAGAGCTTCGCGGACTCCCTGGCCTGCCCCTCCACCTCCTCGCCTGAGATGTTGCAGTGC
CTTCGGCAGAAGGCAGTCGAGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATAGTCAGTTGTAAGAGAGGAGCATGGAGACAGTGGTAAGAACTGCGTCCAGGCTCTTG
GTCTGGGTGGCCTGTGTGCTTGTGGCCCTCTCTGCTGCAGTCACTGGGCGAGAGGCCACT
CAACCTGAAGTCGACACCACCCTGGGCCGCGTGCGAGGCCGGCAGGTGGGCGTGAAGGGC
ACTGACCGCCTTGTGAATGTCTTCCTGGGCATCCCGTTTGCCCAGCCACCCCTGGGGCCT
GGCCGGTTCTCAGCCCCACGCCCAGCGCAGTCCTGGGAGGGTGTGCGGGATGCCAGCACA
GCCCCTGCAATGTGCCCGCAGGATCTGGAGAGGATGAACAACGCCAGATTTGTGCTGGAT
GGAAAGCACCAGATCTTCCCAGTTTCAGAGGACTGCCTGGTCCTCAACATCTACAGCCCA
GCTGAGGCCACGACGGGGGCCGGGAGGCCGGTCATGGTGTGGTTCCATGGAGGCTCTTTG
GTGGTTGGTGCCGCCACCTCCCACGACGGATCTGCCCTGGCCGCCTATGGGGATGTGGTA
GTGGTGACAGTCCAGTACCGCCTGGGGCTCCTTGGCTTCTTCAGCACTGGGGACAAGCAC
GCGCCTGGCAACTGGGGCTTCCTTGATGCAGTGGCTGCTCTCCGCTGGGTGCAAGAGAAC
ATCAGCCCCTTTGGGGGTGACTTCAACTCTGTCACCGTCTTTGGTAGCTCTGCTGGTGCA
AGCATCGTCTCTGCTCTGGTCCTGTCCCCGCTGGCTGCAGGGCTGTTCCATAGAGCTATA
GCAGAGAGTGGAGTCATCACCCTTCCGGGGTTGCTGGATTCTAACCCCTGGCCCCTGGCT
CAGAGCTTCGCGGACTCCCTGGCCTGCCCCTCCACCTCCTCGCCTGAGATGTTGCAGTGC
CTTCGGCAGAAGGCAGTCGAGGAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61886775|ref|XP_582292.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61886775|ref|XP_582292.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               86-314, gnl|bosTau2|chr18 (28204162-28204388)
               

               
               86-314, gnl|Hg17|chr16 (65554564-65554790)
               

               
               86-314, gnl|Mm7|chr8 (103683565-103683791)
               


               
               447-584, gnl|bosTau2|chr18 (28204776-28204913)
               

               
               447-584, gnl|Hg17|chr16 (65555202-65555339)
               

               
               447-584, gnl|Mm7|chr8 (103684191-103684328)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-314, gnl|bosTau2|chr18 (28204162-28204388)
               

               
               86-314, gnl|Hg17|chr16 (65554564-65554790)
               

               
               86-314, gnl|Mm7|chr8 (103683565-103683791)
               


               
               447-584, gnl|bosTau2|chr18 (28204776-28204913)
               

               
               447-584, gnl|Hg17|chr16 (65555202-65555339)
               

               
               447-584, gnl|Mm7|chr8 (103684191-103684328)

	86-314, gnl\|bosTau2\|chr18 (28204162-28204388)
	86-314, gnl\|Hg17\|chr16 (65554564-65554790)
	86-314, gnl\|Mm7\|chr8 (103683565-103683791)

	447-584, gnl\|bosTau2\|chr18 (28204776-28204913)
	447-584, gnl\|Hg17\|chr16 (65555202-65555339)
	447-584, gnl\|Mm7\|chr8 (103684191-103684328)