Ss1.1-Liv1-LVRM10020G08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAGAGACCGTTTTGAACTTTCTTTCCTGGGTCCCATTACACGGGTGTTTACTGGAGGG GAAACTAGGACGAGCTTGGCCCTCGGATTCTGACTGGTTAGTGGAAGAAGTGGGGTCCGT TTTAGTGACTCTCTGAAAAAGCCCAGCAAGATGTCAGACCTGGTCGCAATCTTCCTCCAC CTCCTTCTCTTCAAGTTGGTTGCCCCGGTGACCTTTCGCCACCACCGCTATGATGACCTC GTGCGAACGCTGTACAAGGTGCACAACGAATGCCCCTACATCACTCGGGTTTACAGCATC GGGCGCAGCGTGAAGGGGAGACACCTCTACGTGCTGGAATTCAGTGACTACCCTGGAAAC CACGAGCCCTTGGAACCAGAAGTCAAGTATGTGGGGAACATGCATGGCAATGAGGTGCTG GGCCGTGAGCTGCTGCTGCAGTTGTCGGAGTTCCTGTGCGAGGAGTTCCGAAACGGGAAC CAGCGGATCGTCCGGCTGGTGGAGAGCACGCGCATTCACATCCTGCCGTCCATGAACCCT GATGGCTACGAGGTGGCTGCTGCCCAGGGCCGGAACATCTCTGGGTACCTGATTGGCAGG AACAATGCAAATGGAGTGGACCTGAACCGCAACTTCCCCGATCTCAATACCTACATCTAC TACAATGAGAAGAACGGAGGCCCCAACCACCACTTGCCCCTTCCAGACAACTGGAAAAGT CAGGTGGAACCTGAGACCCAGGCTGTGATCCAGTGGATCCGCTCCTTCAACTTTGTCCTT TCAGCCAATCTCCATGGAGGGGCAGTAGTGGCCAATTACCCATATGACAAGTCCCTTGAG CACCGGGTCCGAGGTTTCCGCCACCCTACCACTACCCCCACGCCTGATGACAAGCTTTTC CAGAAGCTGGCCAAGGTCTACTCCTATGCACATGGATGGATGCACCAAGGTTGGAACTGT GGGGATTACTTCCCAGATGGCATCACCAACGGGGCTTCCTGGTACTCTCTCAGCAAGGGA ATGCAAGACTTTAATTATCTCCATACCAACTGTTTTGAGATCACGCTGGAACTGAGTTGT GACAAGTTCCCACCACAAGAGGAATTACAGCGCGAGTGGCTGGGCAATCGGGAAGCCCTG ATCCAGTTCTTAGAACAGGTACACCAGGGCATCAAGGGAATGGTGCTGGATGAGAATTAT AATAATCTTGCGGACGCAGTCATTTCTGTCAGTGGAATAAACCACGATGTCACTTCAGGT GCCCAAGGCGATTACTTCCGGCTGCTGCTTCCAGGTACCTACACTGTCACTGCCACAGCA CCTGGGTTTGACCCAGAGACAGTGAGTGTGACCGTGGGTCCTGGGGAACCCAAACTGGTT AACTTCCAACTCAAGAGAAGCACCCCTCCAGCAGCCCCTAAGAAAAGAGTTCCCAACTCA GGGCAGAGAGTCAAGGTCTTACCAAAGAAAGTGCAGCCCCGAGCAGCTAGGAAAAAAGAA ATGAAGAAGAAGCAGACCCAGAGAGCCCCTGCCTGAAAGCCACAGTGCCCAGGACAACAC TTTAGATAGGCTTTGTTCTGCTCATCCATCAGATGAAGCATTTATTTTATTATCGAAAAC ATATTTAAATAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAGAGACCGTTTTGAACTTTCTTTCCTGGGTCCCATTACACGGGTGTTTACTGGAGGG GAAACTAGGACGAGCTTGGCCCTCGGATTCTGACTGGTTAGTGGAAGAAGTGGGGTCCGT TTTAGTGACTCTCTGAAAAAGCCCAGCAAGATGTCAGACCTGGTCGCAATCTTCCTCCAC CTCCTTCTCTTCAAGTTGGTTGCCCCGGTGACCTTTCGCCACCACCGCTATGATGACCTC GTGCGAACGCTGTACAAGGTGCACAACGAATGCCCCTACATCACTCGGGTTTACAGCATC GGGCGCAGCGTGAAGGGGAGACACCTCTACGTGCTGGAATTCAGTGACTACCCTGGAAAC CACGAGCCCTTGGAACCAGAAGTCAAGTATGTGGGGAACATGCATGGCAATGAGGTGCTG GGCCGTGAGCTGCTGCTGCAGTTGTCGGAGTTCCTGTGCGAGGAGTTCCGAAACGGGAAC CAGCGGATCGTCCGGCTGGTGGAGAGCACGCGCATTCACATCCTGCCGTCCATGAACCCT GATGGCTACGAGGTGGCTGCTGCCCAGGGCCGGAACATCTCTGGGTACCTGATTGGCAGG AACAATGCAAATGGAGTGGACCTGAACCGCAACTTCCCCGATCTCAATACCTACATCTAC TACAATGAGAAGAACGGAGGCCCCAACCACCACTTGCCCCTTCCAGACAACTGGAAAAGT CAGGTGGAACCTGAGACCCAGGCTGTGATCCAGTGGATCCGCTCCTTCAACTTTGTCCTT TCAGCCAATCTCCATGGAGGGGCAGTAGTGGCCAATTACCCATATGACAAGTCCCTTGAG CACCGGGTCCGAGGTTTCCGCCACCCTACCACTACCCCCACGCCTGATGACAAGCTTTTC CAGAAGCTGGCCAAGGTCTACTCCTATGCACATGGATGGATGCACCAAGGTTGGAACTGT GGGGATTACTTCCCAGATGGCATCACCAACGGGGCTTCCTGGTACTCTCTCAGCAAGGGA ATGCAAGACTTTAATTATCTCCATACCAACTGTTTTGAGATCACGCTGGAACTGAGTTGT GACAAGTTCCCACCACAAGAGGAATTACAGCGCGAGTGGCTGGGCAATCGGGAAGCCCTG ATCCAGTTCTTAGAACAGGTACACCAGGGCATCAAGGGAATGGTGCTGGATGAGAATTAT AATAATCTTGCGGACGCAGTCATTTCTGTCAGTGGAATAAACCACGATGTCACTTCAGGT GCCCAAGGCGATTACTTCCGGCTGCTGCTTCCAGGTACCTACACTGTCACTGCCACAGCA CCTGGGTTTGACCCAGAGACAGTGAGTGTGACCGTGGGTCCTGGGGAACCCAAACTGGTT AACTTCCAACTCAAGAGAAGCACCCCTCCAGCAGCCCCTAAGAAAAGAGTTCCCAACTCA GGGCAGAGAGTCAAGGTCTTACCAAAGAAAGTGCAGCCCCGAGCAGCTAGGAAAAAAGAA ATGAAGAAGAAGCAGACCCAGAGAGCCCCTGCCTGAAAGCCACAGTGCCCAGGACAACAC TTTAGATAGGCTTTGTTCTGCTCATCCATCAGATGAAGCATTTATTTTATTATCGAAAAC ATATTTAAATAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 373-492, + strand, RNAz p=0.79097 | |
| 373-486, + strand, RNAz p=0.712481 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 373-492, + strand, RNAz p=0.79097 | |
| 373-486, + strand, RNAz p=0.712481 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC032692, + |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 2-370, gnl|bosTau2|chr26 (12248746-12248380) | |
| 2-370, gnl|Hg17|chr10 (101831520-101831150) | |
| 2-370, gnl|Mm7|chr19 (43880296-43879939) | |
| 373-564, gnl|bosTau2|chr13 (41367767-41367575) | |
| 373-564, gnl|canFam2|chr24 (21455215-21455008) | |
| 373-564, gnl|danRer3|chr13 (9090976-9091182) | |
| 373-564, gnl|dasNov1|scaffold_34255 (14110-14312) | |
| 373-564, gnl|echTel1|scaffold_319903 (32389-32181) | |
| 373-564, gnl|fr1|chrUn (181822306-181822105) | |
| 373-564, gnl|galGal2|chr6 (30949579-30949781) | |
| 373-564, gnl|hg17|chr20 (2724886-2725093) | |
| 373-564, gnl|Hg17|chr20 (2725087-2724895) | |
| 373-564, gnl|mm7|chr2 (130134878-130135085) | |
| 373-564, gnl|Mm7|chr2 (130135079-130134887) | |
| 373-564, gnl|monDom2|scaffold_10 (48552292-48552500) | |
| 373-564, gnl|oryCun1|scaffold_191517 (4870-5077) | |
| 373-564, gnl|panTro1|chr21 (2701355-2701562) | |
| 373-564, gnl|rheMac2|chr10 (36105362-36105569) | |
| 373-564, gnl|rn3|chr3 (117909818-117910025) | |
| 373-564, gnl|tetNig1|chr20 (2932974-2932769) | |
| 373-564, gnl|xenTro1|scaffold_140 (1904281-1904079) | |
| 720-906, gnl|bosTau2|chr26 (12232233-12232047) | |
| 720-906, gnl|Hg17|chr10 (101815121-101814935) | |
| 720-906, gnl|Mm7|chr19 (43864061-43863875) | |
| 998-1161, gnl|bosTau2|chr26 (11693747-11693586) | |
| 998-1161, gnl|Hg17|chr10 (101806918-101806757) | |
| 998-1161, gnl|Mm7|chr19 (43860204-43860045) | |
| 1377-1632, gnl|bosTau2|chr26 (11686809-11686548) | |
| 1377-1632, gnl|Hg17|chr10 (101792321-101792074) | |
| 1377-1632, gnl|Mm7|chr19 (43850510-43850272) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-370, gnl|bosTau2|chr26 (12248746-12248380) | |
| 2-370, gnl|Hg17|chr10 (101831520-101831150) | |
| 2-370, gnl|Mm7|chr19 (43880296-43879939) | |
| 373-564, gnl|bosTau2|chr13 (41367767-41367575) | |
| 373-564, gnl|canFam2|chr24 (21455215-21455008) | |
| 373-564, gnl|danRer3|chr13 (9090976-9091182) | |
| 373-564, gnl|dasNov1|scaffold_34255 (14110-14312) | |
| 373-564, gnl|echTel1|scaffold_319903 (32389-32181) | |
| 373-564, gnl|fr1|chrUn (181822306-181822105) | |
| 373-564, gnl|galGal2|chr6 (30949579-30949781) | |
| 373-564, gnl|hg17|chr20 (2724886-2725093) | |
| 373-564, gnl|Hg17|chr20 (2725087-2724895) | |
| 373-564, gnl|mm7|chr2 (130134878-130135085) | |
| 373-564, gnl|Mm7|chr2 (130135079-130134887) | |
| 373-564, gnl|monDom2|scaffold_10 (48552292-48552500) | |
| 373-564, gnl|oryCun1|scaffold_191517 (4870-5077) | |
| 373-564, gnl|panTro1|chr21 (2701355-2701562) | |
| 373-564, gnl|rheMac2|chr10 (36105362-36105569) | |
| 373-564, gnl|rn3|chr3 (117909818-117910025) | |
| 373-564, gnl|tetNig1|chr20 (2932974-2932769) | |
| 373-564, gnl|xenTro1|scaffold_140 (1904281-1904079) | |
| 720-906, gnl|bosTau2|chr26 (12232233-12232047) | |
| 720-906, gnl|Hg17|chr10 (101815121-101814935) | |
| 720-906, gnl|Mm7|chr19 (43864061-43863875) | |
| 998-1161, gnl|bosTau2|chr26 (11693747-11693586) | |
| 998-1161, gnl|Hg17|chr10 (101806918-101806757) | |
| 998-1161, gnl|Mm7|chr19 (43860204-43860045) | |
| 1377-1632, gnl|bosTau2|chr26 (11686809-11686548) | |
| 1377-1632, gnl|Hg17|chr10 (101792321-101792074) | |
| 1377-1632, gnl|Mm7|chr19 (43850510-43850272) |