Ss1.1-Liv1-LVRM10050F05.5
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AGTGTCCCGGAGAGGGAGGGCAGGCCGACCAGGTGGGCGCGAACGGAGCCTCGGCGGGCG
AGCGGCCGTAGCCGAGCCGGGCGGTGGGCCGCGCCGGGTGGGCGGGCGCCGCGGCAGCCG
ACAAACGAGAGGGACCGAGTAAAATGTCATAAAATGGAGAAGAAAGCATTAAAGCAAAGG
CAAATGGAAAGGAAAGGCAACAGCATGGCCAGCGTGCTGTCCCGGCGCCTTGGCAAGCGG
TCCCTCTTGGGAGCCCGGGTGTTGGGGCCACTTGGGGCTGTCCCACCCTTGGAGCCGCAG
GCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGACACGTCCTGC
CAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCAGCCAGTGGCC
TTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCCAGGGATGGTG
GAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCAGAAGTTACAA
ATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGAGCTGCAGGGCCCCATCCCCCAGGCG
CCACCTCCAGAGCCTGGAACCCAG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGTGTCCCGGAGAGGGAGGGCAGGCCGACCAGGTGGGCGCGAACGGAGCCTCGGCGGGCG
AGCGGCCGTAGCCGAGCCGGGCGGTGGGCCGCGCCGGGTGGGCGGGCGCCGCGGCAGCCG
ACAAACGAGAGGGACCGAGTAAAATGTCATAAAATGGAGAAGAAAGCATTAAAGCAAAGG
CAAATGGAAAGGAAAGGCAACAGCATGGCCAGCGTGCTGTCCCGGCGCCTTGGCAAGCGG
TCCCTCTTGGGAGCCCGGGTGTTGGGGCCACTTGGGGCTGTCCCACCCTTGGAGCCGCAG
GCAGAGCTGCTGGAGGGGGCGGCTCCCCAGCCCTTCCTTGCCTCTAAGGACACGTCCTGC
CAGGAGCAGCCCAAGGAAGTGCTCAAGGCTCCTGACACCGCAGGTCCTCAGCCAGTGGCC
TTTCAGCCTGGGCAGAAGGTTTGTGTGTGGTATGGGGGTCAAGAATGCCCAGGGATGGTG
GAGCAGCATAGTTGGGCAGAGGATAAGGTGACTGTCTGGCTGTTGGACCAGAAGTTACAA
ATCTGCTGCAAAGCGGAGGAGGTGTGGCTGGCTGAGCTGCAGGGCCCCATCCCCCAGGCG
CCACCTCCAGAGCCTGGAACCCAG
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gi|39841059|ref|NP_950194.1| |
Protein identifier
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gi|39841059|ref|NP_950194.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1-120, gnl|bosTau2|chr8 (5381853-5381977) |
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1-120, gnl|hg17|chr8 (28299356-28299660) |
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1-120, gnl|Hg17|chr8 (28299779-28299524) |
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1-120, gnl|mm7|chr14 (60218803-60218596) |
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1-120, gnl|monDom2|scaffold_1 (68337167-68337379) |
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1-120, gnl|xenTro1|scaffold_3442 (12169-11851) |
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190-440, gnl|bosTau2|chr8 (5410346-5410596) |
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190-440, gnl|canFam2|chr25 (32195445-32195293) |
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190-440, gnl|hg17|chr8 (28274319-28274462) |
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190-440, gnl|Hg17|chr8 (28274580-28274319) |
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190-440, gnl|loxAfr1|scaffold_23530 (27693-27845) |
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190-440, gnl|mm7|chr14 (60245846-60245694) |
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190-440, gnl|Mm7|chr14 (60245579-60245844) |
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190-440, gnl|monDom2|scaffold_1 (68295880-68296029) |
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190-440, gnl|oryCun1|scaffold_213893 (7666-7513) |
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190-440, gnl|panTro1|chr7 (29261033-29261177) |
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190-440, gnl|rheMac2|chr8 (28509937-28510080) |
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190-440, gnl|rn3|chr15 (44822278-44822126) |
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190-440, gnl|xenTro1|scaffold_508 (425205-425336) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-120, gnl|bosTau2|chr8 (5381853-5381977) |
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1-120, gnl|hg17|chr8 (28299356-28299660) |
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1-120, gnl|Hg17|chr8 (28299779-28299524) |
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1-120, gnl|mm7|chr14 (60218803-60218596) |
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1-120, gnl|monDom2|scaffold_1 (68337167-68337379) |
|
1-120, gnl|xenTro1|scaffold_3442 (12169-11851) |
| |
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190-440, gnl|bosTau2|chr8 (5410346-5410596) |
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190-440, gnl|canFam2|chr25 (32195445-32195293) |
|
190-440, gnl|hg17|chr8 (28274319-28274462) |
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190-440, gnl|Hg17|chr8 (28274580-28274319) |
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190-440, gnl|loxAfr1|scaffold_23530 (27693-27845) |
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190-440, gnl|mm7|chr14 (60245846-60245694) |
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190-440, gnl|Mm7|chr14 (60245579-60245844) |
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190-440, gnl|monDom2|scaffold_1 (68295880-68296029) |
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190-440, gnl|oryCun1|scaffold_213893 (7666-7513) |
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190-440, gnl|panTro1|chr7 (29261033-29261177) |
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190-440, gnl|rheMac2|chr8 (28509937-28510080) |
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190-440, gnl|rn3|chr15 (44822278-44822126) |
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190-440, gnl|xenTro1|scaffold_508 (425205-425336) |
