Non-Coding RNA Search

Ss1.1-Liv1-LVRM10056G05.5

Sequence:


               
               AAAGATAAAAGACGAAAAAACTAAAAAAAAAAAAAAACAAAAACAAAAAAAAAACCTAAA
AAAAAAAGGATTATTGGTTGTGCAAAAGAATTGACCACAGGATTCTTTAAAAAGCCTAAT
AACTAGTACATTTCCCCCCTAACATTTCATATGTGTCTGGCACTGTGAGGAGTACTTTAT
GTGCATTATTTTTACTTCATCCTTCCAATAATCCAGTGTGGTAGGTAATACTATTATTCC
GATGTGACACACTAGCAACCTGAGGCACAGTGAGGTAGCTTGCTCAAGGTCAGATAACTT
GTAAGGGGTCTGGGATTCAGGGAATTTATTTTCCAAAAAAAATCTGCTTTATATGCAGTT
GTTTAGTAGCACATCCACTACAAAAACTGAGTCTCAATCATTATCAAAATAGGAGCAGTT
TCTCATTTTTCGCAGCAGTGAGCTCACTGCCCATGAGTAATGGGCTGCTTGGGAAGTGTC
ACCCTGCTTGGCATGTCTTGAAGAGGGTCGCAGAGAGCCCTGCAGCCGGTGCCCTGGCAG
TGGGCTGAGTTAGGTAGCAGGCTTTGACCTGTGTTTACAGTGTGCCCATGGGGGATGTGG
TGAAAAGCAGCAAGAATTGGCCCTGCTTGCTCTGACATCTTGACAAGGGCTTTGACTCCC
CACGGCCTGAAGCCGTCAAAGGAGGTGCCTCCAAGGTCCAGTCTATCTTTGACCATCACC
TGCAGCGGTGGTGTCAGCTCCTGGAGGCATTCCCAAGGCAAAGTGCAAAGGAGGCAGGAT
TTGTCTTAAGTCTGCAGCTTTTTTCAGGGCCAGAGCACCATCCATGCCCGCGCATTGGAG
TCTGCGGGCAGGACCGCCCGTGCTCTCCATGTGAACTTGAGCTTAGCTGTGCACTGTCTC
ACTAGGGCACGTGTGTTTCAAGTTCCTTCCCCTTCCAGCAGTAAAAGCCTTGTCCCTTCT
TGGAGGAATTTCAAGGATCAAGGTTAAGGTGGATTGAACTTTGGGGTGGCAGCAGGTCTT
TCTCCTGCTGTCCAAAACTGGGCATTTATGCGTGCTTTTTTTAAACAGAAATTAACCATG
AGACTCCTGCAGTATACCTTTTTGGCTAAGTCTCAGGTCAAATTGGGAACAGAGGGTCAT
TTTCGCCAAAGCAGGTTGGTTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGATAAAAGACGAAAAAACTAAAAAAAAAAAAAAACAAAAACAAAAAAAAAACCTAAA
AAAAAAAGGATTATTGGTTGTGCAAAAGAATTGACCACAGGATTCTTTAAAAAGCCTAAT
AACTAGTACATTTCCCCCCTAACATTTCATATGTGTCTGGCACTGTGAGGAGTACTTTAT
GTGCATTATTTTTACTTCATCCTTCCAATAATCCAGTGTGGTAGGTAATACTATTATTCC
GATGTGACACACTAGCAACCTGAGGCACAGTGAGGTAGCTTGCTCAAGGTCAGATAACTT
GTAAGGGGTCTGGGATTCAGGGAATTTATTTTCCAAAAAAAATCTGCTTTATATGCAGTT
GTTTAGTAGCACATCCACTACAAAAACTGAGTCTCAATCATTATCAAAATAGGAGCAGTT
TCTCATTTTTCGCAGCAGTGAGCTCACTGCCCATGAGTAATGGGCTGCTTGGGAAGTGTC
ACCCTGCTTGGCATGTCTTGAAGAGGGTCGCAGAGAGCCCTGCAGCCGGTGCCCTGGCAG
TGGGCTGAGTTAGGTAGCAGGCTTTGACCTGTGTTTACAGTGTGCCCATGGGGGATGTGG
TGAAAAGCAGCAAGAATTGGCCCTGCTTGCTCTGACATCTTGACAAGGGCTTTGACTCCC
CACGGCCTGAAGCCGTCAAAGGAGGTGCCTCCAAGGTCCAGTCTATCTTTGACCATCACC
TGCAGCGGTGGTGTCAGCTCCTGGAGGCATTCCCAAGGCAAAGTGCAAAGGAGGCAGGAT
TTGTCTTAAGTCTGCAGCTTTTTTCAGGGCCAGAGCACCATCCATGCCCGCGCATTGGAG
TCTGCGGGCAGGACCGCCCGTGCTCTCCATGTGAACTTGAGCTTAGCTGTGCACTGTCTC
ACTAGGGCACGTGTGTTTCAAGTTCCTTCCCCTTCCAGCAGTAAAAGCCTTGTCCCTTCT
TGGAGGAATTTCAAGGATCAAGGTTAAGGTGGATTGAACTTTGGGGTGGCAGCAGGTCTT
TCTCCTGCTGTCCAAAACTGGGCATTTATGCGTGCTTTTTTTAAACAGAAATTAACCATG
AGACTCCTGCAGTATACCTTTTTGGCTAAGTCTCAGGTCAAATTGGGAACAGAGGGTCAT
TTTCGCCAAAGCAGGTTGGTTCAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               65-320, gnl|bosTau2|chrX (1327223-1326972)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               65-320, gnl|bosTau2|chrX (1327223-1326972)