Ss1.1-Liv1-LVRM10102C07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACAATCTACTAGCAGAGGTTATGCGGCGCCTGAACGTGATCATGGCAGAATCACTGGGC CTCGTCTCCATCTGCCTTTTAGGATATCTACTCAGTGCGGAATGTACAGTTTTCCTTGAT CGTGAAAATGCCACCAAAATTCTGCATCGGCCAAAGAGGTATAATTCAGGCAAACTGGAA GAGTTTGTTCGAGGGAATCTTGAGAGAGAATGTATAGAAGAAAAGTGTAGTTTTGAAGAA GCACGAGAAGTTTTTGAAAACACTGAGAAAACTAATGAATTTTGGAAGCAATATGTTGAT GGAGATCAGTGCGAGCCCAATCCATGCTTAAACGGCGGCCTGTGCAAGGATGACATTAAT TCCTACGAATGTTGGTGTCAAGTTGGATTTGAAGGAAAGAACTGTGAATTAGATGCAACA TGCAACATTAAGAATGGCAGATGCAAGCAGTTTTGTAAAACAGGCGCTGATAGCAAGGTG CTTTGTTCCTGTACCACTGGATACCGACTTGCACCAGACCAGAAGTCCTGCGAACCAGCA GTGCCATTTCCATGCGGAAGAGTTTCTGTCTCACACAGTCCTACGACGCTCACCCGTGCT GAGATTATTTTTTCCAACATGGACTATGAAAATTCTACTGAAGTTGAACCAATTTTGGAT AGCCTCACTGAAAGCAACCAATCATCTGACGACTTAATTCGAATTGTTGGTGGAGAAAAC GCCAAACCAGGTCAATTCCCTTGGCAGGTCCTTCTGAATGGTAAAATTGATGCATTCTGT GGCGGTTCCATCATTAATGAAAAGTGGGTTGTAACGGCAGCCCACTGCATCGAACCTGGT GTTAAAATTACTGTCGTTGCAGGTGAGTATAACACCGAGGAGACAGAACCTACAGAGCAA AGGCGAAATGTGATCCGTGCCATTCCCCACCACAGCTACAATGCCACCGTGAATAAGTAC AGCCATGACATTGCCCTCCTGGAACTGGATGAACCCTTGACGCTGAACAGCTACGTAACC CCTATTTGCATTGCCGACAAGGAGTACACCAACATCTTCCTCAAATTTGGATCTGGCTAT GTGAGTGGCTGGGGGAGAGTCTTCAACAGAGGGCGGTCGGCTACGATTCTTCAGTACCTG AAGGTTCCACTCGTGGACCGAGCTACCTGCCTCCGGTCCACGAAGTTCACCATCTATAGT AACATGTTCTGTGCCGGCTTCCATGAGGGAGGTAAAGATTCCTGCCAAGGAGATAGCGGG GGCCCCCATGTTACCGAGGTGGAAGGTACCAGTTTCTTAACTGGAATTATTAGCTGGGGT GAAGAGTGTGCAGTGAAGGGAAAATATGGAATATATACCAAGGTATCCCGGTATGTCAAC TGGATTAAGGAAAAAACAAAGCTCACTTAAAGAAAAATGTATTTCCAAGGTTGACAGATT TGGGATTGAAAATGGACAGGGTCCTTTACTAACTAATCGCTTTCCTATCTCTTTAAATGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACAATCTACTAGCAGAGGTTATGCGGCGCCTGAACGTGATCATGGCAGAATCACTGGGC CTCGTCTCCATCTGCCTTTTAGGATATCTACTCAGTGCGGAATGTACAGTTTTCCTTGAT CGTGAAAATGCCACCAAAATTCTGCATCGGCCAAAGAGGTATAATTCAGGCAAACTGGAA GAGTTTGTTCGAGGGAATCTTGAGAGAGAATGTATAGAAGAAAAGTGTAGTTTTGAAGAA GCACGAGAAGTTTTTGAAAACACTGAGAAAACTAATGAATTTTGGAAGCAATATGTTGAT GGAGATCAGTGCGAGCCCAATCCATGCTTAAACGGCGGCCTGTGCAAGGATGACATTAAT TCCTACGAATGTTGGTGTCAAGTTGGATTTGAAGGAAAGAACTGTGAATTAGATGCAACA TGCAACATTAAGAATGGCAGATGCAAGCAGTTTTGTAAAACAGGCGCTGATAGCAAGGTG CTTTGTTCCTGTACCACTGGATACCGACTTGCACCAGACCAGAAGTCCTGCGAACCAGCA GTGCCATTTCCATGCGGAAGAGTTTCTGTCTCACACAGTCCTACGACGCTCACCCGTGCT GAGATTATTTTTTCCAACATGGACTATGAAAATTCTACTGAAGTTGAACCAATTTTGGAT AGCCTCACTGAAAGCAACCAATCATCTGACGACTTAATTCGAATTGTTGGTGGAGAAAAC GCCAAACCAGGTCAATTCCCTTGGCAGGTCCTTCTGAATGGTAAAATTGATGCATTCTGT GGCGGTTCCATCATTAATGAAAAGTGGGTTGTAACGGCAGCCCACTGCATCGAACCTGGT GTTAAAATTACTGTCGTTGCAGGTGAGTATAACACCGAGGAGACAGAACCTACAGAGCAA AGGCGAAATGTGATCCGTGCCATTCCCCACCACAGCTACAATGCCACCGTGAATAAGTAC AGCCATGACATTGCCCTCCTGGAACTGGATGAACCCTTGACGCTGAACAGCTACGTAACC CCTATTTGCATTGCCGACAAGGAGTACACCAACATCTTCCTCAAATTTGGATCTGGCTAT GTGAGTGGCTGGGGGAGAGTCTTCAACAGAGGGCGGTCGGCTACGATTCTTCAGTACCTG AAGGTTCCACTCGTGGACCGAGCTACCTGCCTCCGGTCCACGAAGTTCACCATCTATAGT AACATGTTCTGTGCCGGCTTCCATGAGGGAGGTAAAGATTCCTGCCAAGGAGATAGCGGG GGCCCCCATGTTACCGAGGTGGAAGGTACCAGTTTCTTAACTGGAATTATTAGCTGGGGT GAAGAGTGTGCAGTGAAGGGAAAATATGGAATATATACCAAGGTATCCCGGTATGTCAAC TGGATTAAGGAAAAAACAAAGCTCACTTAAAGAAAAATGTATTTCCAAGGTTGACAGATT TGGGATTGAAAATGGACAGGGTCCTTTACTAACTAATCGCTTTCCTATCTCTTTAAATGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1260-1459, + strand, RNAz p=0.773661 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1260-1459, + strand, RNAz p=0.773661 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of NM_000133, + |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 107-273, gnl|bosTau2|chrX (6509380-6509546) | |
| 107-273, gnl|canFam2|chrX (112575484-112575662) | |
| 107-273, gnl|danRer3|chr14 (54030107-54030287) | |
| 107-273, gnl|dasNov1|scaffold_113927 (4690-4515) | |
| 107-273, gnl|echTel1|scaffold_313094 (165684-165506) | |
| 107-273, gnl|fr1|chrUn (139940751-139940574) | |
| 107-273, gnl|hg17|chrX (138344684-138344862) | |
| 107-273, gnl|Hg17|chrX (138344686-138344852) | |
| 107-273, gnl|loxAfr1|scaffold_9692 (12651-12829) | |
| 107-273, gnl|mm7|chrX (55484541-55484719) | |
| 107-273, gnl|Mm7|chrX (55484543-55484709) | |
| 107-273, gnl|monDom2|scaffold_72 (5634676-5634498) | |
| 107-273, gnl|oryCun1|scaffold_202943 (129776-129955) | |
| 107-273, gnl|panTro1|chrX (143040312-143040490) | |
| 107-273, gnl|rheMac2|chrX (137720153-137720331) | |
| 107-273, gnl|rn3|chrX (145605778-145605956) | |
| 107-273, gnl|tetNig1|chr3 (1158227-1158395) | |
| 298-412, gnl|bosTau2|chrX (6513952-6514066) | |
| 298-412, gnl|canFam2|chrX (112579975-112580098) | |
| 298-412, gnl|danRer3|chr14 (54031961-54032081) | |
| 298-412, gnl|dasNov1|scaffold_28123 (7192-7069) | |
| 298-412, gnl|echTel1|scaffold_313094 (160932-160809) | |
| 298-412, gnl|fr1|chrUn (139940399-139940278) | |
| 298-412, gnl|hg17|chrX (138348754-138348877) | |
| 298-412, gnl|Hg17|chrX (138348754-138348868) | |
| 298-412, gnl|loxAfr1|scaffold_9692 (17383-17506) | |
| 298-412, gnl|mm7|chrX (55490709-55490831) | |
| 298-412, gnl|Mm7|chrX (55490709-55490823) | |
| 298-412, gnl|monDom2|scaffold_72 (5628349-5628226) | |
| 298-412, gnl|oryCun1|scaffold_200885 (3241-3364) | |
| 298-412, gnl|panTro1|chrX (143044382-143044505) | |
| 298-412, gnl|rheMac2|chrX (137724226-137724349) | |
| 298-412, gnl|rn3|chrX (145611173-145611295) | |
| 298-412, gnl|tetNig1|chr3 (1158853-1158976) | |
| 540-752, gnl|bosTau2|chrX (6523684-6523896) | |
| 540-752, gnl|Hg17|chrX (138358739-138358948) | |
| 540-752, gnl|Mm7|chrX (55499645-55499884) | |
| 861-1498, gnl|bosTau2|chrX (6534888-6535525) | |
| 861-1498, gnl|Hg17|chrX (138369201-138369839) | |
| 861-1498, gnl|Mm7|chrX (55509601-55510236) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 107-273, gnl|bosTau2|chrX (6509380-6509546) | |
| 107-273, gnl|canFam2|chrX (112575484-112575662) | |
| 107-273, gnl|danRer3|chr14 (54030107-54030287) | |
| 107-273, gnl|dasNov1|scaffold_113927 (4690-4515) | |
| 107-273, gnl|echTel1|scaffold_313094 (165684-165506) | |
| 107-273, gnl|fr1|chrUn (139940751-139940574) | |
| 107-273, gnl|hg17|chrX (138344684-138344862) | |
| 107-273, gnl|Hg17|chrX (138344686-138344852) | |
| 107-273, gnl|loxAfr1|scaffold_9692 (12651-12829) | |
| 107-273, gnl|mm7|chrX (55484541-55484719) | |
| 107-273, gnl|Mm7|chrX (55484543-55484709) | |
| 107-273, gnl|monDom2|scaffold_72 (5634676-5634498) | |
| 107-273, gnl|oryCun1|scaffold_202943 (129776-129955) | |
| 107-273, gnl|panTro1|chrX (143040312-143040490) | |
| 107-273, gnl|rheMac2|chrX (137720153-137720331) | |
| 107-273, gnl|rn3|chrX (145605778-145605956) | |
| 107-273, gnl|tetNig1|chr3 (1158227-1158395) | |
| 298-412, gnl|bosTau2|chrX (6513952-6514066) | |
| 298-412, gnl|canFam2|chrX (112579975-112580098) | |
| 298-412, gnl|danRer3|chr14 (54031961-54032081) | |
| 298-412, gnl|dasNov1|scaffold_28123 (7192-7069) | |
| 298-412, gnl|echTel1|scaffold_313094 (160932-160809) | |
| 298-412, gnl|fr1|chrUn (139940399-139940278) | |
| 298-412, gnl|hg17|chrX (138348754-138348877) | |
| 298-412, gnl|Hg17|chrX (138348754-138348868) | |
| 298-412, gnl|loxAfr1|scaffold_9692 (17383-17506) | |
| 298-412, gnl|mm7|chrX (55490709-55490831) | |
| 298-412, gnl|Mm7|chrX (55490709-55490823) | |
| 298-412, gnl|monDom2|scaffold_72 (5628349-5628226) | |
| 298-412, gnl|oryCun1|scaffold_200885 (3241-3364) | |
| 298-412, gnl|panTro1|chrX (143044382-143044505) | |
| 298-412, gnl|rheMac2|chrX (137724226-137724349) | |
| 298-412, gnl|rn3|chrX (145611173-145611295) | |
| 298-412, gnl|tetNig1|chr3 (1158853-1158976) | |
| 540-752, gnl|bosTau2|chrX (6523684-6523896) | |
| 540-752, gnl|Hg17|chrX (138358739-138358948) | |
| 540-752, gnl|Mm7|chrX (55499645-55499884) | |
| 861-1498, gnl|bosTau2|chrX (6534888-6535525) | |
| 861-1498, gnl|Hg17|chrX (138369201-138369839) | |
| 861-1498, gnl|Mm7|chrX (55509601-55510236) |