Non-Coding RNA Search

Ss1.1-Liv1-LVRM10112B12.5

Sequence:


               
               ACAACTCGGCTTTGAATGGTTTTGTGAACCCTCCTACCAGCAACACCAACAAAGTGAGCC
GACAAGTATTTACTGAGTTACTACTCTTGACAAAGCTTTGTGCTCTCCTGCATTTGGTGT
GGCAAAGCATACAAATAACTGGGCTTTGCCAGGGTTCAAGGGAAGGCTTCCCATCGGCCT
GCTCTTACAGACCCTAGGTTCATGTCACATTCTGCAGTGAGTCAGAAGACGGAGTGGTGC
TGTCCTGCTAGATGCTATGTGGCCAAAGAGATCATCATGGGGCATTGGGTCAAAAACTGG
------------------------------------------------------------
------------------------------------------------------------
------------GCACTGGTAGGTCCCTGGCTTGGGAACTTCCATATGCTGTGGATATGG
CCATTTAAAAAAAAAAAAAAAAAAAGCTGGAGTTTTAGCACCTCTGAACTTCAAGCTTAA
ATAATCCAAGTTGGTATAATGGTTTAATGAAAGGCCCTTGTTTTGCATATGCTCAGTCAA
ATTAAATTATTTATTTGGGTTGGTTAGCAACTTTCTGAAACACAAGAGTAGAATTTAAAG
CAGGTCCAGGAGTTCCCGTCATGGCTCAGCAGTTCATGAACCCGACTAGGATCCATGAGG
ATGTGGGTTCGATCCCTGGCCTCG------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AATAAAATGAAATTAAAAAAAAAATCAGGTCCAGCTCTGGAAAATGGA
CATTTCACATCCCTTCTCTCTGTAGCTTAGACTCTGGAACCCACTCCCAGCCTTGTTCCC
TATCCCCAAATAATGCTCCTCCTGACCTGGCACAACCTAAGAGCAGAGGAAAGGTGGAGG
TCTGGAGGTCCCGCCGCGGCTCAGTGGAAACGAATCTGACTAGGATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAACTCGGCTTTGAATGGTTTTGTGAACCCTCCTACCAGCAACACCAACAAAGTGAGCC
GACAAGTATTTACTGAGTTACTACTCTTGACAAAGCTTTGTGCTCTCCTGCATTTGGTGT
GGCAAAGCATACAAATAACTGGGCTTTGCCAGGGTTCAAGGGAAGGCTTCCCATCGGCCT
GCTCTTACAGACCCTAGGTTCATGTCACATTCTGCAGTGAGTCAGAAGACGGAGTGGTGC
TGTCCTGCTAGATGCTATGTGGCCAAAGAGATCATCATGGGGCATTGGGTCAAAAACTGG
------------------------------------------------------------
------------------------------------------------------------
------------GCACTGGTAGGTCCCTGGCTTGGGAACTTCCATATGCTGTGGATATGG
CCATTTAAAAAAAAAAAAAAAAAAAGCTGGAGTTTTAGCACCTCTGAACTTCAAGCTTAA
ATAATCCAAGTTGGTATAATGGTTTAATGAAAGGCCCTTGTTTTGCATATGCTCAGTCAA
ATTAAATTATTTATTTGGGTTGGTTAGCAACTTTCTGAAACACAAGAGTAGAATTTAAAG
CAGGTCCAGGAGTTCCCGTCATGGCTCAGCAGTTCATGAACCCGACTAGGATCCATGAGG
ATGTGGGTTCGATCCCTGGCCTCG------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------AATAAAATGAAATTAAAAAAAAAATCAGGTCCAGCTCTGGAAAATGGA
CATTTCACATCCCTTCTCTCTGTAGCTTAGACTCTGGAACCCACTCCCAGCCTTGTTCCC
TATCCCCAAATAATGCTCCTCCTGACCTGGCACAACCTAAGAGCAGAGGAAAGGTGGAGG
TCTGGAGGTCCCGCCGCGGCTCAGTGGAAACGAATCTGACTAGGATCC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               14-294, gnl|bosTau2|chr5 (71209381-71209664)
               

               
               14-294, gnl|Hg17|chr22 (40096274-40096609)
               


               
               374-537, gnl|bosTau2|chr5 (71209674-71209840)
               

               
               374-537, gnl|Hg17|chr22 (40096619-40097108)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-294, gnl|bosTau2|chr5 (71209381-71209664)
               

               
               14-294, gnl|Hg17|chr22 (40096274-40096609)
               


               
               374-537, gnl|bosTau2|chr5 (71209674-71209840)
               

               
               374-537, gnl|Hg17|chr22 (40096619-40097108)

	14-294, gnl\|bosTau2\|chr5 (71209381-71209664)
	14-294, gnl\|Hg17\|chr22 (40096274-40096609)

	374-537, gnl\|bosTau2\|chr5 (71209674-71209840)
	374-537, gnl\|Hg17\|chr22 (40096619-40097108)