Ss1.1-Liv1-LVRM10132F10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAGTTGGAGGGAGTGACACATCCGTCTCCAGTCCCTCCCTTCTCACCCATCTTCACCTG GCTCTCACGTGCTCACGGGCACTTAGGCAGAAGTGAGCCCTGTGGTTCTGCCCAAGACGA GCCTATTGGCTTTAAAGGAGAGAAAACAAAACGAAAAAAAATCAGGCAGAGTTCCAGCCT TAAAACCTACCTAGAAGAAGCTGAGTGGAGAAGTGTGAAGAGATGAATGGACCCGTGGAT GGCTTGTGCGACCATTCTCTAAGCGAAGAAGGAGCCTTCATGTTCACATCAGAATCTGTG GGAGAGGGGCACCCGGACAAGATCTGTGACCAGATCAGTGATGCAGTGCTGGACGCCCAT CTCAAGCAGGACCCCAATGCCAAGGTGGCCTGTGAGACGGTGTGTAAGACGGGCATGGTG CTGCTGTGCGGTGAGATCACGTCCATGGCCATGGTGGACTACCAGCGGGTGGTCAGAGAC ACCATCAAGCACATTGGCTACGATGATTCTGCCAAGGGCTTTGACTTCAAGACCTGCAAT GTGCTGGTGGCTCTGGAGCAGCAGTCCCCGGATATCGCCCAGTGTGTCCATCTGGACAGA AATGAAGAAGATGTTGGTGCCGGCGATCAGGGCCTGATGTTCGGCTATGCCACGGATGAG ACGGAGGAATGCATGCCCCTCACCATCATCCTGGCGCACAGACTCAATGCCCGCATGGCG GCCCTGCGGCGTTCGGGGCTGCTGCCCTGGCTGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAGTTGGAGGGAGTGACACATCCGTCTCCAGTCCCTCCCTTCTCACCCATCTTCACCTG GCTCTCACGTGCTCACGGGCACTTAGGCAGAAGTGAGCCCTGTGGTTCTGCCCAAGACGA GCCTATTGGCTTTAAAGGAGAGAAAACAAAACGAAAAAAAATCAGGCAGAGTTCCAGCCT TAAAACCTACCTAGAAGAAGCTGAGTGGAGAAGTGTGAAGAGATGAATGGACCCGTGGAT GGCTTGTGCGACCATTCTCTAAGCGAAGAAGGAGCCTTCATGTTCACATCAGAATCTGTG GGAGAGGGGCACCCGGACAAGATCTGTGACCAGATCAGTGATGCAGTGCTGGACGCCCAT CTCAAGCAGGACCCCAATGCCAAGGTGGCCTGTGAGACGGTGTGTAAGACGGGCATGGTG CTGCTGTGCGGTGAGATCACGTCCATGGCCATGGTGGACTACCAGCGGGTGGTCAGAGAC ACCATCAAGCACATTGGCTACGATGATTCTGCCAAGGGCTTTGACTTCAAGACCTGCAAT GTGCTGGTGGCTCTGGAGCAGCAGTCCCCGGATATCGCCCAGTGTGTCCATCTGGACAGA AATGAAGAAGATGTTGGTGCCGGCGATCAGGGCCTGATGTTCGGCTATGCCACGGATGAG ACGGAGGAATGCATGCCCCTCACCATCATCCTGGCGCACAGACTCAATGCCCGCATGGCG GCCCTGCGGCGTTCGGGGCTGCTGCCCTGGCTGAAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 34-151, - strand, RNAz p=0.82923 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 34-151, - strand, RNAz p=0.82923 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-321, gnl|bosTau2|chr28 (27964894-27965209) | |
| 1-321, gnl|Hg17|chr10 (82039390-82039064) | |
| 1-321, gnl|Mm7|chr14 (38531836-38532154) | |
| 507-631, gnl|bosTau2|chr28 (27972657-27972780) | |
| 507-631, gnl|canFam2|chr4 (32669609-32669736) | |
| 507-631, gnl|danRer3|chr13 (16537720-16537846) | |
| 507-631, gnl|dasNov1|scaffold_13982 (22634-22761) | |
| 507-631, gnl|echTel1|scaffold_278684 (11952-11825) | |
| 507-631, gnl|fr1|chrUn (165364843-165364716) | |
| 507-631, gnl|galGal2|chr6 (3875911-3875786) | |
| 507-631, gnl|hg17|chr10 (82030414-82030541) | |
| 507-631, gnl|Hg17|chr10 (82030538-82030415) | |
| 507-631, gnl|loxAfr1|scaffold_144145 (5232-5343) | |
| 507-631, gnl|mm7|chr14 (38540798-38540672) | |
| 507-631, gnl|Mm7|chr14 (38540672-38540795) | |
| 507-631, gnl|monDom2|scaffold_14 (11487613-11487738) | |
| 507-631, gnl|oryCun1|scaffold_194409 (19352-19225) | |
| 507-631, gnl|panTro1|chr8 (83416933-83417060) | |
| 507-631, gnl|rheMac2|chr9 (57117363-57117236) | |
| 507-631, gnl|rn3|chr16 (17553435-17553309) | |
| 507-631, gnl|tetNig1|chr17 (5545178-5545304) | |
| 507-631, gnl|xenTro1|scaffold_217 (531236-531109) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-321, gnl|bosTau2|chr28 (27964894-27965209) | |
| 1-321, gnl|Hg17|chr10 (82039390-82039064) | |
| 1-321, gnl|Mm7|chr14 (38531836-38532154) | |
| 507-631, gnl|bosTau2|chr28 (27972657-27972780) | |
| 507-631, gnl|canFam2|chr4 (32669609-32669736) | |
| 507-631, gnl|danRer3|chr13 (16537720-16537846) | |
| 507-631, gnl|dasNov1|scaffold_13982 (22634-22761) | |
| 507-631, gnl|echTel1|scaffold_278684 (11952-11825) | |
| 507-631, gnl|fr1|chrUn (165364843-165364716) | |
| 507-631, gnl|galGal2|chr6 (3875911-3875786) | |
| 507-631, gnl|hg17|chr10 (82030414-82030541) | |
| 507-631, gnl|Hg17|chr10 (82030538-82030415) | |
| 507-631, gnl|loxAfr1|scaffold_144145 (5232-5343) | |
| 507-631, gnl|mm7|chr14 (38540798-38540672) | |
| 507-631, gnl|Mm7|chr14 (38540672-38540795) | |
| 507-631, gnl|monDom2|scaffold_14 (11487613-11487738) | |
| 507-631, gnl|oryCun1|scaffold_194409 (19352-19225) | |
| 507-631, gnl|panTro1|chr8 (83416933-83417060) | |
| 507-631, gnl|rheMac2|chr9 (57117363-57117236) | |
| 507-631, gnl|rn3|chr16 (17553435-17553309) | |
| 507-631, gnl|tetNig1|chr17 (5545178-5545304) | |
| 507-631, gnl|xenTro1|scaffold_217 (531236-531109) |