Non-Coding RNA Search

Ss1.1-Liv1-LVRM10135D09.5

Sequence:


               
               TATCAGCTCCTACAATCCTGCTGATCTCAAGCACCTGCCTCTACAGTTGGTACAGATGAC
ATTATTCCAGCCCAGTCTCTTCTCAGCCACAGAGCTGCTCCTGGCCTCTGCCATCTTCTG
CCTTGTATTCTGGGTGGTCAGGACCTGGCAGCCTCAGGTCCCCAAAGGCCTGAAGAGTCC
ACCAGGGCCCTGGGGCTGGCCGCTGCTCGGGCACGTGCTGACCTTGGGCAAGAGCCCACA
CCTGGCCCTGGCGAGGCTGAGCCAGCGCTATGGAGATGTGCTGCAGATCCGCATTGGCTG
CACCCCTGTGCTGGTGCTCAGCGGCCTGGACACCATCCGGCAGGCCCTGGTGCGGCAGGG
CGACGATTTCAAGGGACGGCCCGACCTCTACAGCTTCACTCTGATCTCTAATGGCCAGAG
CATGACCTTCAACCCAGACTCTGGACCAGTGTGGGCCGCCCGTCGGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATCAGCTCCTACAATCCTGCTGATCTCAAGCACCTGCCTCTACAGTTGGTACAGATGAC
ATTATTCCAGCCCAGTCTCTTCTCAGCCACAGAGCTGCTCCTGGCCTCTGCCATCTTCTG
CCTTGTATTCTGGGTGGTCAGGACCTGGCAGCCTCAGGTCCCCAAAGGCCTGAAGAGTCC
ACCAGGGCCCTGGGGCTGGCCGCTGCTCGGGCACGTGCTGACCTTGGGCAAGAGCCCACA
CCTGGCCCTGGCGAGGCTGAGCCAGCGCTATGGAGATGTGCTGCAGATCCGCATTGGCTG
CACCCCTGTGCTGGTGCTCAGCGGCCTGGACACCATCCGGCAGGCCCTGGTGCGGCAGGG
CGACGATTTCAAGGGACGGCCCGACCTCTACAGCTTCACTCTGATCTCTAATGGCCAGAG
CATGACCTTCAACCCAGACTCTGGACCAGTGTGGGCCGCCCGTCGGCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|38194178|dbj|BAD01478.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|38194178|dbj|BAD01478.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               234-353, + strand, RNAz p=0.566629

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               234-353, + strand, RNAz p=0.566629

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               35-468, gnl|bosTau2|chr21 (22936146-22936579)
               

               
               35-468, gnl|Hg17|chr15 (72829112-72829545)
               

               
               35-468, gnl|Mm7|chr9 (57710215-57709786)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               35-468, gnl|bosTau2|chr21 (22936146-22936579)
               

               
               35-468, gnl|Hg17|chr15 (72829112-72829545)
               

               
               35-468, gnl|Mm7|chr9 (57710215-57709786)

	35-468, gnl\|bosTau2\|chr21 (22936146-22936579)
	35-468, gnl\|Hg17\|chr15 (72829112-72829545)
	35-468, gnl\|Mm7\|chr9 (57710215-57709786)