Ss1.1-Liv1-LVRM10154H01.5
|
TTATTTTACTTCAAGCCTTTCTCTCATGTCTCAGAGACAGTCTTCACAGTAAATGCCAAT
CAAGGAAGCACATGCAAATCAGTGGAGCGAAATTTCCTATATATTTGAACGTTGCATTGA
TCACTGGATCTGAAGTATCTAAGCCAATTGCCTAAGATGATCATTAAAATATTTCCTATG
TGAAGTGGTGTAGGGATACTAATTTGGAACTGACAGTCTTCTATATTGTTGCATTATCTT
ATGTAACTCGGCATCTGGAAGTCAGGTAAAATGTTGCTGAATGTATAAATGAGAGAAAAA
TGAGAAATGCTATTAAATCTTCTTTGCCAGAAGTCCCTATAAATAGACAAGTCACCTTGC
GGGTGGGAGACTGAAATTTTCCATGCTCGAGAAGGTACCGTATCCTCCAGAATCTTTGGG
GGACTTTTGATTCTTTAATTCGTTGTCTTGATCCTGTTGACAGGTCCCTGGGGTGGGGAA
ATGGCTCAAACAGCATTGCCATGGAGGCCCCTTTGGCACAGAATTGGTGAGATCATGGAG
TGAGTGTGGGTTGAACATAGGGTAGGGAATCAGATCTGAGGCCAGCGAGAAAGCCAGACT
TCAAATTAACAGCATCTGAAGCCTAAAAATTCAAGGTTCATGGATGTCTTGAAAGGAACC
AGACCTAGAAAAAGACCAGGATTTCTGAGCTAGGGAGCTTTGCCTGGGGGTAACAGAGAA
CTCTAGATGGAAGGTAAAAGACCCACCCTATCCCTGGGACTTACCTGGTGCTCCGTTCAA
GGCGTTTGCTATACATCGTCTTCTTTGATCTTCATCAGGCCACCAAGAGAGGTGGTGCCT
ACACAGCGTTATAGGTGAAGAAAGTGGAATCTTTCTTTTCTAAGAAAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTATTTTACTTCAAGCCTTTCTCTCATGTCTCAGAGACAGTCTTCACAGTAAATGCCAAT
CAAGGAAGCACATGCAAATCAGTGGAGCGAAATTTCCTATATATTTGAACGTTGCATTGA
TCACTGGATCTGAAGTATCTAAGCCAATTGCCTAAGATGATCATTAAAATATTTCCTATG
TGAAGTGGTGTAGGGATACTAATTTGGAACTGACAGTCTTCTATATTGTTGCATTATCTT
ATGTAACTCGGCATCTGGAAGTCAGGTAAAATGTTGCTGAATGTATAAATGAGAGAAAAA
TGAGAAATGCTATTAAATCTTCTTTGCCAGAAGTCCCTATAAATAGACAAGTCACCTTGC
GGGTGGGAGACTGAAATTTTCCATGCTCGAGAAGGTACCGTATCCTCCAGAATCTTTGGG
GGACTTTTGATTCTTTAATTCGTTGTCTTGATCCTGTTGACAGGTCCCTGGGGTGGGGAA
ATGGCTCAAACAGCATTGCCATGGAGGCCCCTTTGGCACAGAATTGGTGAGATCATGGAG
TGAGTGTGGGTTGAACATAGGGTAGGGAATCAGATCTGAGGCCAGCGAGAAAGCCAGACT
TCAAATTAACAGCATCTGAAGCCTAAAAATTCAAGGTTCATGGATGTCTTGAAAGGAACC
AGACCTAGAAAAAGACCAGGATTTCTGAGCTAGGGAGCTTTGCCTGGGGGTAACAGAGAA
CTCTAGATGGAAGGTAAAAGACCCACCCTATCCCTGGGACTTACCTGGTGCTCCGTTCAA
GGCGTTTGCTATACATCGTCTTCTTTGATCTTCATCAGGCCACCAAGAGAGGTGGTGCCT
ACACAGCGTTATAGGTGAAGAAAGTGGAATCTTTCTTTTCTAAGAAAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
6-560, gnl|bosTau2|chr4 (33012668-33013234) |
|
6-560, gnl|Hg17|chr7 (36974746-36974170) |
|
6-560, gnl|Mm7|chr13 (19692435-19693187) |
| |
|
616-867, gnl|bosTau2|chr4 (33013547-33013813) |
|
616-867, gnl|canFam2|chr14 (51407740-51408011) |
|
616-867, gnl|hg17|chr7 (36973831-36974102) |
|
616-867, gnl|Hg17|chr7 (36974101-36973830) |
|
616-867, gnl|loxAfr1|scaffold_39 (274091-273890) |
|
616-867, gnl|mm7|chr13 (19693459-19693253) |
|
616-867, gnl|oryCun1|scaffold_178292 (73311-73067) |
|
616-867, gnl|panTro1|chr6 (38163971-38164243) |
|
616-867, gnl|rheMac2|chr3 (89079467-89079201) |
|
616-867, gnl|rn3|chr17 (52274129-52274313) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-560, gnl|bosTau2|chr4 (33012668-33013234) |
|
6-560, gnl|Hg17|chr7 (36974746-36974170) |
|
6-560, gnl|Mm7|chr13 (19692435-19693187) |
| |
|
616-867, gnl|bosTau2|chr4 (33013547-33013813) |
|
616-867, gnl|canFam2|chr14 (51407740-51408011) |
|
616-867, gnl|hg17|chr7 (36973831-36974102) |
|
616-867, gnl|Hg17|chr7 (36974101-36973830) |
|
616-867, gnl|loxAfr1|scaffold_39 (274091-273890) |
|
616-867, gnl|mm7|chr13 (19693459-19693253) |
|
616-867, gnl|oryCun1|scaffold_178292 (73311-73067) |
|
616-867, gnl|panTro1|chr6 (38163971-38164243) |
|
616-867, gnl|rheMac2|chr3 (89079467-89079201) |
|
616-867, gnl|rn3|chr17 (52274129-52274313) |
