Ss1.1-Liv1-LVRM10158H11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATTTGACTCTATGTAATCTCAGGAGCAGAGGAAGATTTTTCTCTGTGATTTTTACACAT GAGAGAATTAAAAAGTGGTCCTAGTTTCCTGTTATTAACACTTTTCATATTAAGGACCTG TTTCTTATTCATGGAAGCAGAAGCTTGCAATGCCAGACCCTTGTCATCCCCGTCTGGCAG GGCTCAGAAATCGGAAGTGACGCTTTTCAGAAATTTTTAAATCTCCTGGGTGACACAATC ACGCTCAAGGGCTGGACGGGCTACCGTGGCGGTCTGGACACCAAAAATGACACCACGGGG ATTCATTCCGTTTATACCATATACCAAGGCCATGAGATCATGTTTCATGTTTCCACCATG TTGCCATACTCCAAAGAGAACAAACAGCAGGTGGAAAGGAAGCGTCACATTGGAAACGAC ATCGTCACCATTGTGTTCCAGGAAGGCGAGGAGCCCTCTCCGGCCTTTAAGCCTTCCATG ATCCGCTCCCACTTCACCCGTATCCTGGGCCTGGGTGGACGCTCCAGTTTGGCAGCTGCT GGCCGGCATCTCTGGGCTCTAAGTGACCCTCAAACCAAACGTTACAGTGACCGGCGTGGT GGGATTGGTTTGCGTTGCGGGATTCTTAGACCCTCTGTGTTGAGTTTTAATTAATTAATG GGACTTTGCCCTTCTTCCCTCTCCATCCACGGCCGTAGAAACGTCGACGAACTCTGGATA TGTTGATTCGATCTTTATACCAGGATTTGATGCCAGATTTGCATAAGAACATGCTGAACA GACGATCTTTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATTTGACTCTATGTAATCTCAGGAGCAGAGGAAGATTTTTCTCTGTGATTTTTACACAT GAGAGAATTAAAAAGTGGTCCTAGTTTCCTGTTATTAACACTTTTCATATTAAGGACCTG TTTCTTATTCATGGAAGCAGAAGCTTGCAATGCCAGACCCTTGTCATCCCCGTCTGGCAG GGCTCAGAAATCGGAAGTGACGCTTTTCAGAAATTTTTAAATCTCCTGGGTGACACAATC ACGCTCAAGGGCTGGACGGGCTACCGTGGCGGTCTGGACACCAAAAATGACACCACGGGG ATTCATTCCGTTTATACCATATACCAAGGCCATGAGATCATGTTTCATGTTTCCACCATG TTGCCATACTCCAAAGAGAACAAACAGCAGGTGGAAAGGAAGCGTCACATTGGAAACGAC ATCGTCACCATTGTGTTCCAGGAAGGCGAGGAGCCCTCTCCGGCCTTTAAGCCTTCCATG ATCCGCTCCCACTTCACCCGTATCCTGGGCCTGGGTGGACGCTCCAGTTTGGCAGCTGCT GGCCGGCATCTCTGGGCTCTAAGTGACCCTCAAACCAAACGTTACAGTGACCGGCGTGGT GGGATTGGTTTGCGTTGCGGGATTCTTAGACCCTCTGTGTTGAGTTTTAATTAATTAATG GGACTTTGCCCTTCTTCCCTCTCCATCCACGGCCGTAGAAACGTCGACGAACTCTGGATA TGTTGATTCGATCTTTATACCAGGATTTGATGCCAGATTTGCATAAGAACATGCTGAACA GACGATCTTTCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 388-506, - strand, RNAz p=0.85337 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 388-506, - strand, RNAz p=0.85337 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 13-140, gnl|bosTau2|chr11 (74854798-74854669) | |
| 13-140, gnl|Hg17|chr9 (127174456-127174577) | |
| 13-140, gnl|Mm7|chr2 (33041779-33041667) | |
| 185-286, gnl|bosTau2|chr11 (74854427-74854326) | |
| 185-286, gnl|canFam2|chr9 (59324763-59324634) | |
| 185-286, gnl|danRer3|chr5 (28821474-28821580) | |
| 185-286, gnl|echTel1|scaffold_323234 (39847-39718) | |
| 185-286, gnl|fr1|chrUn (120310117-120310225) | |
| 185-286, gnl|galGal2|chr17 (29429-29290) | |
| 185-286, gnl|hg17|chr9 (127174832-127174961) | |
| 185-286, gnl|Hg17|chr9 (127174853-127174954) | |
| 185-286, gnl|loxAfr1|scaffold_1962 (46372-46501) | |
| 185-286, gnl|mm7|chr2 (33041467-33041337) | |
| 185-286, gnl|Mm7|chr2 (33041443-33041342) | |
| 185-286, gnl|monDom2|scaffold_38 (22878743-22878875) | |
| 185-286, gnl|oryCun1|scaffold_145102 (2608-2479) | |
| 185-286, gnl|panTro1|chr11 (111991892-111992021) | |
| 185-286, gnl|rheMac2|chr15 (99249364-99249235) | |
| 185-286, gnl|rn3|chr3 (11920670-11920540) | |
| 185-286, gnl|tetNig1|chr4 (3037901-3038014) | |
| 185-286, gnl|xenTro1|scaffold_95 (2397119-2396984) | |
| 388-636, gnl|bosTau2|chr11 (74846750-74846515) | |
| 388-636, gnl|Hg17|chr9 (127177958-127178236) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-140, gnl|bosTau2|chr11 (74854798-74854669) | |
| 13-140, gnl|Hg17|chr9 (127174456-127174577) | |
| 13-140, gnl|Mm7|chr2 (33041779-33041667) | |
| 185-286, gnl|bosTau2|chr11 (74854427-74854326) | |
| 185-286, gnl|canFam2|chr9 (59324763-59324634) | |
| 185-286, gnl|danRer3|chr5 (28821474-28821580) | |
| 185-286, gnl|echTel1|scaffold_323234 (39847-39718) | |
| 185-286, gnl|fr1|chrUn (120310117-120310225) | |
| 185-286, gnl|galGal2|chr17 (29429-29290) | |
| 185-286, gnl|hg17|chr9 (127174832-127174961) | |
| 185-286, gnl|Hg17|chr9 (127174853-127174954) | |
| 185-286, gnl|loxAfr1|scaffold_1962 (46372-46501) | |
| 185-286, gnl|mm7|chr2 (33041467-33041337) | |
| 185-286, gnl|Mm7|chr2 (33041443-33041342) | |
| 185-286, gnl|monDom2|scaffold_38 (22878743-22878875) | |
| 185-286, gnl|oryCun1|scaffold_145102 (2608-2479) | |
| 185-286, gnl|panTro1|chr11 (111991892-111992021) | |
| 185-286, gnl|rheMac2|chr15 (99249364-99249235) | |
| 185-286, gnl|rn3|chr3 (11920670-11920540) | |
| 185-286, gnl|tetNig1|chr4 (3037901-3038014) | |
| 185-286, gnl|xenTro1|scaffold_95 (2397119-2396984) | |
| 388-636, gnl|bosTau2|chr11 (74846750-74846515) | |
| 388-636, gnl|Hg17|chr9 (127177958-127178236) |