Ss1.1-Liv1-LVRM1C120088.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGAGCCGCTCCGCCTGGGTCTCCTGCAGACATGTGCAGCCTGCGCGCACTGTGCTCTGG CCTGCCCCTGCGGCCGCTCCCAGAGAACCGAGGGCGCTGTGCTGGGGTGCCCCACGCCCC GGTCCGGACCCCAGGCCTCAGCCCCACAGAGGAACAGCTGGCGCTGAGGAATGCCCTTCG GTACTTCCCCCCGGATGTCCAGGAGCAGCTGGCCCCAGAGTTTGCCCAGGAACTGCGACT GTACGGGCACATCTACATGTACCGGTTCTGCCCTAACTTGGAAATGAAGGCCTACCCAGT GGAGCAGTACCCCTGCCGGACTAAAGCCGCTGCAGCCATCATGCATATGATCATGAACAA CCTGGACCCTGCCGTGGCCCAGTTTCCCCAGGAGCTCGTGACCTATGGAGGAAATGGGCA GGTGTTCAGCAACTGGGCTCAGTTCTGGCTGACAATGTCCTACTTGTCACAGATGACGGA GGAGCAGACGCTGGTCATGTACAGTGGGCACCCGCTGGGCCTCTTTCCCAGCAGCCCTGG GGCCCCAAGGCTGGTCATCACCAATGGGATGGTGATTCCCAACTACTCCTCCAGGATAGA GTATGAGAAGCTCTTCGCCATGGGAGTTACCATGTACGGCCAGATGACGGCGGGCAGTTA CTGCTACATTGGCCCCCAAGGCATCGTCCACGGCACGGTGCTCACTGTCTTGAACGCCGG GCGTCGGTACCTGGGTGTCGAGGACCTGGCGGGCAAGGTCTTTGTCACCTCTGGGCTGGG GGGGATGAGTGGCGCCCAGGCCAAAGCCGCAGTCATCGTGGGCTGCATCGGCGTGATAGC AGAGGTGGATGGAGCGGCCCTCAGGAAACGCTACCAGCAAGGCTGGCTAATGGAAGTGAC CAACAGCTTGGACCACTGCATTGAAAGACTCAGGGAAGCCAGGAAGAGGAAGGAGGCACT CAGCCTTGGTTACCATGGCAACGTGGTGGATCTTTGGGAGCGCCTGGTCCATGAACTGGA CACAACGGGGGAGCTCTTGGTGGACCTGGGGTCAGACCAGACATCCTGCCACAACCCCTT CAACGGCGGCTACTACCCCGTGCAGCTGGGCTTTGCGGAGGCTCAGAGCCTCATGGCCTC CGACCCCGCTGCCTTCAAAGGCCTGGTCCAGGAAAGCCTGAGGAGACATGTCTCAGCCAT CAACAGGCTGGCCCAGGGGAACTTCTTCTTTTGGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGAGCCGCTCCGCCTGGGTCTCCTGCAGACATGTGCAGCCTGCGCGCACTGTGCTCTGG CCTGCCCCTGCGGCCGCTCCCAGAGAACCGAGGGCGCTGTGCTGGGGTGCCCCACGCCCC GGTCCGGACCCCAGGCCTCAGCCCCACAGAGGAACAGCTGGCGCTGAGGAATGCCCTTCG GTACTTCCCCCCGGATGTCCAGGAGCAGCTGGCCCCAGAGTTTGCCCAGGAACTGCGACT GTACGGGCACATCTACATGTACCGGTTCTGCCCTAACTTGGAAATGAAGGCCTACCCAGT GGAGCAGTACCCCTGCCGGACTAAAGCCGCTGCAGCCATCATGCATATGATCATGAACAA CCTGGACCCTGCCGTGGCCCAGTTTCCCCAGGAGCTCGTGACCTATGGAGGAAATGGGCA GGTGTTCAGCAACTGGGCTCAGTTCTGGCTGACAATGTCCTACTTGTCACAGATGACGGA GGAGCAGACGCTGGTCATGTACAGTGGGCACCCGCTGGGCCTCTTTCCCAGCAGCCCTGG GGCCCCAAGGCTGGTCATCACCAATGGGATGGTGATTCCCAACTACTCCTCCAGGATAGA GTATGAGAAGCTCTTCGCCATGGGAGTTACCATGTACGGCCAGATGACGGCGGGCAGTTA CTGCTACATTGGCCCCCAAGGCATCGTCCACGGCACGGTGCTCACTGTCTTGAACGCCGG GCGTCGGTACCTGGGTGTCGAGGACCTGGCGGGCAAGGTCTTTGTCACCTCTGGGCTGGG GGGGATGAGTGGCGCCCAGGCCAAAGCCGCAGTCATCGTGGGCTGCATCGGCGTGATAGC AGAGGTGGATGGAGCGGCCCTCAGGAAACGCTACCAGCAAGGCTGGCTAATGGAAGTGAC CAACAGCTTGGACCACTGCATTGAAAGACTCAGGGAAGCCAGGAAGAGGAAGGAGGCACT CAGCCTTGGTTACCATGGCAACGTGGTGGATCTTTGGGAGCGCCTGGTCCATGAACTGGA CACAACGGGGGAGCTCTTGGTGGACCTGGGGTCAGACCAGACATCCTGCCACAACCCCTT CAACGGCGGCTACTACCCCGTGCAGCTGGGCTTTGCGGAGGCTCAGAGCCTCATGGCCTC CGACCCCGCTGCCTTCAAAGGCCTGGTCCAGGAAAGCCTGAGGAGACATGTCTCAGCCAT CAACAGGCTGGCCCAGGGGAACTTCTTCTTTTGGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
| 155-287, gnl|bosTau2|chr7 (16882321-16882189) | |
| 155-287, gnl|canFam2|chr20 (3708619-3708793) | |
| 155-287, gnl|danRer3|chrUn (106195111-106195247) | |
| 155-287, gnl|echTel1|scaffold_163888 (3568-3738) | |
| 155-287, gnl|fr1|chrUn (228454209-228454050) | |
| 155-287, gnl|hg17|chr3 (127712178-127712353) | |
| 155-287, gnl|Hg17|chr3 (127712338-127712206) | |
| 155-287, gnl|mm7|chr6 (90412051-90411877) | |
| 155-287, gnl|Mm7|chr6 (90411888-90412020) | |
| 155-287, gnl|oryCun1|scaffold_183448 (20936-21115) | |
| 155-287, gnl|panTro1|chr2_random (8392456-8392281) | |
| 155-287, gnl|rheMac2|chr2 (46286570-46286745) | |
| 155-287, gnl|rn3|chr4 (124840048-124839874) | |
| 155-287, gnl|tetNig1|chr11 (6367682-6367535) | |
| 155-287, gnl|xenTro1|scaffold_368 (927339-927168) | |
| 440-580, gnl|bosTau2|chr7 (16880465-16880325) | |
| 440-580, gnl|canFam2|chr20 (3705715-3705942) | |
| 440-580, gnl|danRer3|chrUn (106193568-106193753) | |
| 440-580, gnl|echTel1|scaffold_163888 (400-636) | |
| 440-580, gnl|fr1|chrUn (228454791-228454614) | |
| 440-580, gnl|hg17|chr3 (127709379-127709640) | |
| 440-580, gnl|Hg17|chr3 (127709639-127709475) | |
| 440-580, gnl|loxAfr1|scaffold_63178 (4796-5028) | |
| 440-580, gnl|mm7|chr6 (90413800-90413580) | |
| 440-580, gnl|Mm7|chr6 (90413579-90413718) | |
| 440-580, gnl|oryCun1|scaffold_183448 (18599-18783) | |
| 440-580, gnl|panTro1|chr2_random (8395255-8394994) | |
| 440-580, gnl|rheMac2|chr2 (46283759-46284019) | |
| 440-580, gnl|rn3|chr4 (124841805-124841586) | |
| 440-580, gnl|tetNig1|chr11 (6368239-6368061) | |
| 440-580, gnl|xenTro1|scaffold_368 (930474-930252) | |
| 700-847, gnl|bosTau2|chr7 (16878740-16878593) | |
| 700-847, gnl|canFam2|chr20 (3701854-3701957) | |
| 700-847, gnl|danRer3|chrUn (106191555-106191664) | |
| 700-847, gnl|fr1|chrUn (228455475-228455377) | |
| 700-847, gnl|hg17|chr3 (127707224-127707333) | |
| 700-847, gnl|Hg17|chr3 (127707386-127707239) | |
| 700-847, gnl|loxAfr1|scaffold_2739 (87147-87247) | |
| 700-847, gnl|mm7|chr6 (90419308-90419199) | |
| 700-847, gnl|Mm7|chr6 (90419144-90419291) | |
| 700-847, gnl|monDom2|scaffold_5 (43505494-43505388) | |
| 700-847, gnl|oryCun1|scaffold_183448 (16477-16588) | |
| 700-847, gnl|rheMac2|chr2 (46281290-46281399) | |
| 700-847, gnl|rn3|chr4 (124847237-124847128) | |
| 700-847, gnl|tetNig1|chr11 (6368874-6368778) | |
| 700-847, gnl|xenTro1|scaffold_368 (931572-931475) | |
| 996-1176, gnl|bosTau2|chr7 (16876400-16876220) | |
| 996-1176, gnl|canFam2|chr20 (3698056-3698243) | |
| 996-1176, gnl|danRer3|chrUn (106189740-106189924) | |
| 996-1176, gnl|dasNov1|scaffold_62847 (3679-3866) | |
| 996-1176, gnl|fr1|chrUn (228456229-228456045) | |
| 996-1176, gnl|hg17|chr3 (127702235-127702422) | |
| 996-1176, gnl|Hg17|chr3 (127702416-127702236) | |
| 996-1176, gnl|loxAfr1|scaffold_149884 (3793-3980) | |
| 996-1176, gnl|mm7|chr6 (90421854-90421666) | |
| 996-1176, gnl|Mm7|chr6 (90421671-90421851) | |
| 996-1176, gnl|monDom2|scaffold_5 (43511808-43511624) | |
| 996-1176, gnl|panTro1|chr2 (129550539-129550726) | |
| 996-1176, gnl|rheMac2|chr2 (46276421-46276608) | |
| 996-1176, gnl|rn3|chr4 (124849789-124849601) | |
| 996-1176, gnl|tetNig1|chr11 (6369538-6369354) |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 155-287, gnl|bosTau2|chr7 (16882321-16882189) | |
| 155-287, gnl|canFam2|chr20 (3708619-3708793) | |
| 155-287, gnl|danRer3|chrUn (106195111-106195247) | |
| 155-287, gnl|echTel1|scaffold_163888 (3568-3738) | |
| 155-287, gnl|fr1|chrUn (228454209-228454050) | |
| 155-287, gnl|hg17|chr3 (127712178-127712353) | |
| 155-287, gnl|Hg17|chr3 (127712338-127712206) | |
| 155-287, gnl|mm7|chr6 (90412051-90411877) | |
| 155-287, gnl|Mm7|chr6 (90411888-90412020) | |
| 155-287, gnl|oryCun1|scaffold_183448 (20936-21115) | |
| 155-287, gnl|panTro1|chr2_random (8392456-8392281) | |
| 155-287, gnl|rheMac2|chr2 (46286570-46286745) | |
| 155-287, gnl|rn3|chr4 (124840048-124839874) | |
| 155-287, gnl|tetNig1|chr11 (6367682-6367535) | |
| 155-287, gnl|xenTro1|scaffold_368 (927339-927168) | |
| 440-580, gnl|bosTau2|chr7 (16880465-16880325) | |
| 440-580, gnl|canFam2|chr20 (3705715-3705942) | |
| 440-580, gnl|danRer3|chrUn (106193568-106193753) | |
| 440-580, gnl|echTel1|scaffold_163888 (400-636) | |
| 440-580, gnl|fr1|chrUn (228454791-228454614) | |
| 440-580, gnl|hg17|chr3 (127709379-127709640) | |
| 440-580, gnl|Hg17|chr3 (127709639-127709475) | |
| 440-580, gnl|loxAfr1|scaffold_63178 (4796-5028) | |
| 440-580, gnl|mm7|chr6 (90413800-90413580) | |
| 440-580, gnl|Mm7|chr6 (90413579-90413718) | |
| 440-580, gnl|oryCun1|scaffold_183448 (18599-18783) | |
| 440-580, gnl|panTro1|chr2_random (8395255-8394994) | |
| 440-580, gnl|rheMac2|chr2 (46283759-46284019) | |
| 440-580, gnl|rn3|chr4 (124841805-124841586) | |
| 440-580, gnl|tetNig1|chr11 (6368239-6368061) | |
| 440-580, gnl|xenTro1|scaffold_368 (930474-930252) | |
| 700-847, gnl|bosTau2|chr7 (16878740-16878593) | |
| 700-847, gnl|canFam2|chr20 (3701854-3701957) | |
| 700-847, gnl|danRer3|chrUn (106191555-106191664) | |
| 700-847, gnl|fr1|chrUn (228455475-228455377) | |
| 700-847, gnl|hg17|chr3 (127707224-127707333) | |
| 700-847, gnl|Hg17|chr3 (127707386-127707239) | |
| 700-847, gnl|loxAfr1|scaffold_2739 (87147-87247) | |
| 700-847, gnl|mm7|chr6 (90419308-90419199) | |
| 700-847, gnl|Mm7|chr6 (90419144-90419291) | |
| 700-847, gnl|monDom2|scaffold_5 (43505494-43505388) | |
| 700-847, gnl|oryCun1|scaffold_183448 (16477-16588) | |
| 700-847, gnl|rheMac2|chr2 (46281290-46281399) | |
| 700-847, gnl|rn3|chr4 (124847237-124847128) | |
| 700-847, gnl|tetNig1|chr11 (6368874-6368778) | |
| 700-847, gnl|xenTro1|scaffold_368 (931572-931475) | |
| 996-1176, gnl|bosTau2|chr7 (16876400-16876220) | |
| 996-1176, gnl|canFam2|chr20 (3698056-3698243) | |
| 996-1176, gnl|danRer3|chrUn (106189740-106189924) | |
| 996-1176, gnl|dasNov1|scaffold_62847 (3679-3866) | |
| 996-1176, gnl|fr1|chrUn (228456229-228456045) | |
| 996-1176, gnl|hg17|chr3 (127702235-127702422) | |
| 996-1176, gnl|Hg17|chr3 (127702416-127702236) | |
| 996-1176, gnl|loxAfr1|scaffold_149884 (3793-3980) | |
| 996-1176, gnl|mm7|chr6 (90421854-90421666) | |
| 996-1176, gnl|Mm7|chr6 (90421671-90421851) | |
| 996-1176, gnl|monDom2|scaffold_5 (43511808-43511624) | |
| 996-1176, gnl|panTro1|chr2 (129550539-129550726) | |
| 996-1176, gnl|rheMac2|chr2 (46276421-46276608) | |
| 996-1176, gnl|rn3|chr4 (124849789-124849601) | |
| 996-1176, gnl|tetNig1|chr11 (6369538-6369354) |