Ss1.1-Liv1-LVRM1D030204.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGACTGTGTACATCTCCCAGGTGAAGAGCAGAGGCCACCCGGCTGTCTATAGGTTCTC CCTCAATGCCAGCCTGCCTGCCCCTTGGCAGATCGTGTCCCCCGGGGACGGGGAGGTGCC CTCCTTCCAGGTGAGCCCGGGCCCTCATGCAGTGAGCTGTCGCTACCAGGGGAGGGGGCC CTCAATGCCATGCTGGTGGGCACTGGTCACCCTGGGGTCTGCAAGGCTGAAGCTGCTACT GGCCTGCGACGCCAAGCGGGGCTGGAAGTTTGACTTCAGCTTCTACGTGGCCGCCAAGGA GCAGCAGCACACTCGGAAGCTATACTTTGCCCAGTCCCACAAGCCCCCTTTCCACGGGCG CGTGTGCACGGCACCTCCCGGTTGCCTGCTTAACTCCAGCCCCGACGGGCCGACCAAGGG CTTCTTCTACGTGCCCAGCGAGAAAGTGCCCAAGGCCCGCCTCTCCGCCACCTTCGGCTT CAACCCCTGCATGAACACAGGCTGCGGGAAGCCGGCAGTGCGGCCGCTGGTGGATACGGG CGCCATGGTCTTCGTGGTCTTTGGCATCATTGGCNATCACCGCACGCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGACTGTGTACATCTCCCAGGTGAAGAGCAGAGGCCACCCGGCTGTCTATAGGTTCTC CCTCAATGCCAGCCTGCCTGCCCCTTGGCAGATCGTGTCCCCCGGGGACGGGGAGGTGCC CTCCTTCCAGGTGAGCCCGGGCCCTCATGCAGTGAGCTGTCGCTACCAGGGGAGGGGGCC CTCAATGCCATGCTGGTGGGCACTGGTCACCCTGGGGTCTGCAAGGCTGAAGCTGCTACT GGCCTGCGACGCCAAGCGGGGCTGGAAGTTTGACTTCAGCTTCTACGTGGCCGCCAAGGA GCAGCAGCACACTCGGAAGCTATACTTTGCCCAGTCCCACAAGCCCCCTTTCCACGGGCG CGTGTGCACGGCACCTCCCGGTTGCCTGCTTAACTCCAGCCCCGACGGGCCGACCAAGGG CTTCTTCTACGTGCCCAGCGAGAAAGTGCCCAAGGCCCGCCTCTCCGCCACCTTCGGCTT CAACCCCTGCATGAACACAGGCTGCGGGAAGCCGGCAGTGCGGCCGCTGGTGGATACGGG CGCCATGGTCTTCGTGGTCTTTGGCATCATTGGCNATCACCGCACGCG |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 5-199, - strand, RNAz p=0.633602 | |
| 449-567, - strand, RNAz p=0.505184 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 5-199, - strand, RNAz p=0.633602 | |
| 449-567, - strand, RNAz p=0.505184 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 5-218, gnl|bosTau2|chr16 (21796484-21796272) | |
| 5-218, gnl|Hg17|chr1 (11519510-11519723) | |
| 5-218, gnl|Mm7|chr4 (147243902-147243699) | |
| 315-446, gnl|bosTau2|chr16 (21792625-21792494) | |
| 315-446, gnl|canFam2|chr2 (87538644-87538486) | |
| 315-446, gnl|echTel1|scaffold_232326 (8544-8702) | |
| 315-446, gnl|fr1|chrUn (277872128-277871976) | |
| 315-446, gnl|galGal2|chr21 (5453860-5453700) | |
| 315-446, gnl|hg17|chr1 (11523859-11524030) | |
| 315-446, gnl|Hg17|chr1 (11523878-11524009) | |
| 315-446, gnl|loxAfr1|scaffold_41760 (10751-10593) | |
| 315-446, gnl|mm7|chr4 (147240578-147240410) | |
| 315-446, gnl|Mm7|chr4 (147240558-147240427) | |
| 315-446, gnl|monDom2|scaffold_175 (661451-661280) | |
| 315-446, gnl|oryCun1|scaffold_184754 (14424-14263) | |
| 315-446, gnl|panTro1|chr1 (11739375-11739546) | |
| 315-446, gnl|rheMac2|chr1 (14627740-14627911) | |
| 315-446, gnl|rn3|chr5 (165339922-165339754) | |
| 315-446, gnl|xenTro1|scaffold_746 (296330-296182) | |
| 449-588, gnl|bosTau2|chr16 (21792414-21792275) | |
| 449-588, gnl|Hg17|chr1 (11524112-11524251) | |
| 449-588, gnl|Mm7|chr4 (147240331-147240192) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-218, gnl|bosTau2|chr16 (21796484-21796272) | |
| 5-218, gnl|Hg17|chr1 (11519510-11519723) | |
| 5-218, gnl|Mm7|chr4 (147243902-147243699) | |
| 315-446, gnl|bosTau2|chr16 (21792625-21792494) | |
| 315-446, gnl|canFam2|chr2 (87538644-87538486) | |
| 315-446, gnl|echTel1|scaffold_232326 (8544-8702) | |
| 315-446, gnl|fr1|chrUn (277872128-277871976) | |
| 315-446, gnl|galGal2|chr21 (5453860-5453700) | |
| 315-446, gnl|hg17|chr1 (11523859-11524030) | |
| 315-446, gnl|Hg17|chr1 (11523878-11524009) | |
| 315-446, gnl|loxAfr1|scaffold_41760 (10751-10593) | |
| 315-446, gnl|mm7|chr4 (147240578-147240410) | |
| 315-446, gnl|Mm7|chr4 (147240558-147240427) | |
| 315-446, gnl|monDom2|scaffold_175 (661451-661280) | |
| 315-446, gnl|oryCun1|scaffold_184754 (14424-14263) | |
| 315-446, gnl|panTro1|chr1 (11739375-11739546) | |
| 315-446, gnl|rheMac2|chr1 (14627740-14627911) | |
| 315-446, gnl|rn3|chr5 (165339922-165339754) | |
| 315-446, gnl|xenTro1|scaffold_746 (296330-296182) | |
| 449-588, gnl|bosTau2|chr16 (21792414-21792275) | |
| 449-588, gnl|Hg17|chr1 (11524112-11524251) | |
| 449-588, gnl|Mm7|chr4 (147240331-147240192) |