Ss1.1-Liv1-LVRM1D050204.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGACGTACAAGACCATCGGGCCAGAGTGGGACCAGCAGGAGGAAGGCGTGAGTGAGAGCG ATGGAGATGAGGAGTACGCCATGGCTTCCTCAGCCGAGAGCTCCCCCGGGGAGTACGAGT GGGAGTACGACGAAGAGGAGGAGAAGAACCAGCTGGAGATCGAGCGACTGGAGGAGCAGC TGTCCATCAATGTCTATGACTACAACTGCCACGTGGACCTGATCCGGCTGCTCCGGCTGG AAGGGGAGCTTACCAAAGTGAGGATGGCCCGCCAGAAGATGAGTGAGATCTTTCCTTTGA CCGAAGAGCTCTGGCTGGAGTGGCTGCACGACGAGATCAGCATGGCTCTGGATGGCCTGG ACCGAGAGCACGTGTACGACCTCTTTGAGAAAGCGGTGAAGGATTACATCTGTCCAAACA TTTGGCTAGAGTATGGCCAGTATTCAGTCGGCGGGATCGGTCAGAAAGGTGGCCTCGAGA AAGTCCGCTCTGTGTTTGAAAGGGCCCTCTCGTCTGTCGGTTTGCATATGACCAAAGGAC TCGCCATCTGGGAGGCCTATCGGGAGTTTGAAAGTGCCATCGTGGAAGCTGCCCGGCTGG AGAAAGTTCACAGTCTCTTCCGGCGACAGTTGGCGATCCCACTCTACGATATGGAGGCAA CATTTGCAGAGTATGAAGAATGGTCAGAAGACCCCATACCAGAGTCAGTAATTCAGAACT ATAACAAAGCACTACAGCAGCTGGAGAAATATAAACCCTATGAAGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGACGTACAAGACCATCGGGCCAGAGTGGGACCAGCAGGAGGAAGGCGTGAGTGAGAGCG ATGGAGATGAGGAGTACGCCATGGCTTCCTCAGCCGAGAGCTCCCCCGGGGAGTACGAGT GGGAGTACGACGAAGAGGAGGAGAAGAACCAGCTGGAGATCGAGCGACTGGAGGAGCAGC TGTCCATCAATGTCTATGACTACAACTGCCACGTGGACCTGATCCGGCTGCTCCGGCTGG AAGGGGAGCTTACCAAAGTGAGGATGGCCCGCCAGAAGATGAGTGAGATCTTTCCTTTGA CCGAAGAGCTCTGGCTGGAGTGGCTGCACGACGAGATCAGCATGGCTCTGGATGGCCTGG ACCGAGAGCACGTGTACGACCTCTTTGAGAAAGCGGTGAAGGATTACATCTGTCCAAACA TTTGGCTAGAGTATGGCCAGTATTCAGTCGGCGGGATCGGTCAGAAAGGTGGCCTCGAGA AAGTCCGCTCTGTGTTTGAAAGGGCCCTCTCGTCTGTCGGTTTGCATATGACCAAAGGAC TCGCCATCTGGGAGGCCTATCGGGAGTTTGAAAGTGCCATCGTGGAAGCTGCCCGGCTGG AGAAAGTTCACAGTCTCTTCCGGCGACAGTTGGCGATCCCACTCTACGATATGGAGGCAA CATTTGCAGAGTATGAAGAATGGTCAGAAGACCCCATACCAGAGTCAGTAATTCAGAACT ATAACAAAGCACTACAGCAGCTGGAGAAATATAAACCCTATGAAGAAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 65-182, + strand, RNAz p=0.521522 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 65-182, + strand, RNAz p=0.521522 |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 1-182, gnl|bosTau2|chr17 (43107588-43107766) | |
| 1-182, gnl|canFam2|chr26 (21335193-21334995) | |
| 1-182, gnl|danRer3|chr5 (10630511-10630317) | |
| 1-182, gnl|fr1|chrUn (1905080-1904918) | |
| 1-182, gnl|hg17|chr12 (107457065-107457257) | |
| 1-182, gnl|Hg17|chr12 (107457261-107457083) | |
| 1-182, gnl|loxAfr1|scaffold_39222 (8708-8903) | |
| 1-182, gnl|mm7|chr5 (112993147-112993346) | |
| 1-182, gnl|Mm7|chr5 (112993350-112993169) | |
| 1-182, gnl|monDom2|scaffold_145 (462088-461889) | |
| 1-182, gnl|oryCun1|scaffold_83198 (1072-1255) | |
| 1-182, gnl|panTro1|chr10 (110013047-110013239) | |
| 1-182, gnl|rheMac2|chr11 (109567227-109567419) | |
| 1-182, gnl|rn3|chr12 (43757217-43757021) | |
| 412-599, gnl|bosTau2|chr17 (43121517-43121704) | |
| 412-599, gnl|canFam2|chr26 (21350078-21349861) | |
| 412-599, gnl|danRer3|chr5 (10635560-10635380) | |
| 412-599, gnl|dasNov1|scaffold_190992 (874-658) | |
| 412-599, gnl|echTel1|scaffold_166934 (2629-2846) | |
| 412-599, gnl|fr1|chrUn (1906187-1905991) | |
| 412-599, gnl|galGal2|chr15 (6488100-6488315) | |
| 412-599, gnl|hg17|chr12 (107441377-107441594) | |
| 412-599, gnl|Hg17|chr12 (107441566-107441379) | |
| 412-599, gnl|loxAfr1|scaffold_39222 (507-723) | |
| 412-599, gnl|mm7|chr5 (112982941-112983144) | |
| 412-599, gnl|Mm7|chr5 (112983130-112982943) | |
| 412-599, gnl|monDom2|scaffold_145 (477318-477101) | |
| 412-599, gnl|oryCun1|scaffold_207168 (18524-18742) | |
| 412-599, gnl|panTro1|chr10 (109997380-109997597) | |
| 412-599, gnl|rheMac2|chr11 (109554791-109555008) | |
| 412-599, gnl|rn3|chr12 (43767267-43767064) | |
| 412-599, gnl|tetNig1|chr12 (6495909-6495734) | |
| 412-599, gnl|xenTro1|scaffold_891 (29153-28950) | |
| 648-768, gnl|bosTau2|chr17 (43124257-43124377) | |
| 648-768, gnl|canFam2|chr26 (21352929-21352768) | |
| 648-768, gnl|danRer3|chr5 (10637215-10637057) | |
| 648-768, gnl|dasNov1|scaffold_190992 (3994-3833) | |
| 648-768, gnl|echTel1|scaffold_166934 (402-555) | |
| 648-768, gnl|fr1|chrUn (1906904-1906771) | |
| 648-768, gnl|galGal2|chrUn (82495430-82495582) | |
| 648-768, gnl|hg17|chr12 (107439246-107439407) | |
| 648-768, gnl|Hg17|chr12 (107439396-107439276) | |
| 648-768, gnl|loxAfr1|scaffold_16259 (56444-56605) | |
| 648-768, gnl|mm7|chr5 (112979958-112980126) | |
| 648-768, gnl|Mm7|chr5 (112980115-112979995) | |
| 648-768, gnl|monDom2|scaffold_145 (479750-479596) | |
| 648-768, gnl|oryCun1|scaffold_207168 (15787-15946) | |
| 648-768, gnl|panTro1|chr10 (109995249-109995410) | |
| 648-768, gnl|rheMac2|chr11 (109552653-109552808) | |
| 648-768, gnl|rn3|chr12 (43769983-43769818) | |
| 648-768, gnl|tetNig1|chr12 (6496464-6496319) | |
| 648-768, gnl|xenTro1|scaffold_891 (30653-30483) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-182, gnl|bosTau2|chr17 (43107588-43107766) | |
| 1-182, gnl|canFam2|chr26 (21335193-21334995) | |
| 1-182, gnl|danRer3|chr5 (10630511-10630317) | |
| 1-182, gnl|fr1|chrUn (1905080-1904918) | |
| 1-182, gnl|hg17|chr12 (107457065-107457257) | |
| 1-182, gnl|Hg17|chr12 (107457261-107457083) | |
| 1-182, gnl|loxAfr1|scaffold_39222 (8708-8903) | |
| 1-182, gnl|mm7|chr5 (112993147-112993346) | |
| 1-182, gnl|Mm7|chr5 (112993350-112993169) | |
| 1-182, gnl|monDom2|scaffold_145 (462088-461889) | |
| 1-182, gnl|oryCun1|scaffold_83198 (1072-1255) | |
| 1-182, gnl|panTro1|chr10 (110013047-110013239) | |
| 1-182, gnl|rheMac2|chr11 (109567227-109567419) | |
| 1-182, gnl|rn3|chr12 (43757217-43757021) | |
| 412-599, gnl|bosTau2|chr17 (43121517-43121704) | |
| 412-599, gnl|canFam2|chr26 (21350078-21349861) | |
| 412-599, gnl|danRer3|chr5 (10635560-10635380) | |
| 412-599, gnl|dasNov1|scaffold_190992 (874-658) | |
| 412-599, gnl|echTel1|scaffold_166934 (2629-2846) | |
| 412-599, gnl|fr1|chrUn (1906187-1905991) | |
| 412-599, gnl|galGal2|chr15 (6488100-6488315) | |
| 412-599, gnl|hg17|chr12 (107441377-107441594) | |
| 412-599, gnl|Hg17|chr12 (107441566-107441379) | |
| 412-599, gnl|loxAfr1|scaffold_39222 (507-723) | |
| 412-599, gnl|mm7|chr5 (112982941-112983144) | |
| 412-599, gnl|Mm7|chr5 (112983130-112982943) | |
| 412-599, gnl|monDom2|scaffold_145 (477318-477101) | |
| 412-599, gnl|oryCun1|scaffold_207168 (18524-18742) | |
| 412-599, gnl|panTro1|chr10 (109997380-109997597) | |
| 412-599, gnl|rheMac2|chr11 (109554791-109555008) | |
| 412-599, gnl|rn3|chr12 (43767267-43767064) | |
| 412-599, gnl|tetNig1|chr12 (6495909-6495734) | |
| 412-599, gnl|xenTro1|scaffold_891 (29153-28950) | |
| 648-768, gnl|bosTau2|chr17 (43124257-43124377) | |
| 648-768, gnl|canFam2|chr26 (21352929-21352768) | |
| 648-768, gnl|danRer3|chr5 (10637215-10637057) | |
| 648-768, gnl|dasNov1|scaffold_190992 (3994-3833) | |
| 648-768, gnl|echTel1|scaffold_166934 (402-555) | |
| 648-768, gnl|fr1|chrUn (1906904-1906771) | |
| 648-768, gnl|galGal2|chrUn (82495430-82495582) | |
| 648-768, gnl|hg17|chr12 (107439246-107439407) | |
| 648-768, gnl|Hg17|chr12 (107439396-107439276) | |
| 648-768, gnl|loxAfr1|scaffold_16259 (56444-56605) | |
| 648-768, gnl|mm7|chr5 (112979958-112980126) | |
| 648-768, gnl|Mm7|chr5 (112980115-112979995) | |
| 648-768, gnl|monDom2|scaffold_145 (479750-479596) | |
| 648-768, gnl|oryCun1|scaffold_207168 (15787-15946) | |
| 648-768, gnl|panTro1|chr10 (109995249-109995410) | |
| 648-768, gnl|rheMac2|chr11 (109552653-109552808) | |
| 648-768, gnl|rn3|chr12 (43769983-43769818) | |
| 648-768, gnl|tetNig1|chr12 (6496464-6496319) | |
| 648-768, gnl|xenTro1|scaffold_891 (30653-30483) |