Non-Coding RNA Search

Ss1.1-Liv1-LVRM1E050169.5

Sequence:


               
               ATTACAGCTGCTGGAGCAGCAGCGGCCCCCGCCCCCGGGCACCCCTCCCGGGCCCTCGAC
GTCCGGCCCCGCACGAAGAGCAGCAGGAGAGGGGCGGCAGGATGAATGTGGGAACGGCGC
ACAGCGAGGTGAACCCCAACACGCGGGTGATGAACAGCCGCGGCATCTGGCTGTCCTATG
TGCTGGCCATCGGGCTCCTGCACGTCGTGCTGCTCAGCATCCCCTTTGTGAGCGTCCCCG
TCGTCTGGACCCTCACCAACCTCATCCACAACATGGGCATGTACATCTTCCTGCACACGG
TGAAGGGGACACCCTTTGAGACCCCGGACCAGGGCAAGGCAAGGCTGCTGACCCACTGGG
AGCAGATGGACTATGGGGTCCAGTTCACGGCGTCTCGGAAATTCCTGACCATCACCCCCA
TCGTGCTGTACTTCCTCACCAGCTTCTACACCAAGTACGACCAGATCCACTTCATCCTCA
ACACTGTGTCCCTGATGAGCGTGCTCATCCCCAAGCTGCCCCAGCTCCACGGCGTGCGGA
TTTTTGGAATCAACAAGTACTGAGGGTGCAGCCCCTTCCCCTGCCCGGGATGGCAGGGAG
GGGCAGAAGCCTGTGCTGTGAGGCTGACGATGACGGAAGGAGCCTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTACAGCTGCTGGAGCAGCAGCGGCCCCCGCCCCCGGGCACCCCTCCCGGGCCCTCGAC
GTCCGGCCCCGCACGAAGAGCAGCAGGAGAGGGGCGGCAGGATGAATGTGGGAACGGCGC
ACAGCGAGGTGAACCCCAACACGCGGGTGATGAACAGCCGCGGCATCTGGCTGTCCTATG
TGCTGGCCATCGGGCTCCTGCACGTCGTGCTGCTCAGCATCCCCTTTGTGAGCGTCCCCG
TCGTCTGGACCCTCACCAACCTCATCCACAACATGGGCATGTACATCTTCCTGCACACGG
TGAAGGGGACACCCTTTGAGACCCCGGACCAGGGCAAGGCAAGGCTGCTGACCCACTGGG
AGCAGATGGACTATGGGGTCCAGTTCACGGCGTCTCGGAAATTCCTGACCATCACCCCCA
TCGTGCTGTACTTCCTCACCAGCTTCTACACCAAGTACGACCAGATCCACTTCATCCTCA
ACACTGTGTCCCTGATGAGCGTGCTCATCCCCAAGCTGCCCCAGCTCCACGGCGTGCGGA
TTTTTGGAATCAACAAGTACTGAGGGTGCAGCCCCTTCCCCTGCCCGGGATGGCAGGGAG
GGGCAGAAGCCTGTGCTGTGAGGCTGACGATGACGGAAGGAGCCTCTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|55732798|emb|CAH93096.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55732798|emb|CAH93096.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               83-276, gnl|bosTau2|chr19 (32527872-32527679)
               

               
               83-276, gnl|Hg17|chr17 (35333997-35333808)
               

               
               83-276, gnl|Mm7|chr11 (98693175-98692980)
               


               
               279-429, gnl|bosTau2|chr5 (35054082-35053932)
               

               
               279-429, gnl|Hg17|chr12 (54499396-54499546)
               

               
               279-429, gnl|Mm7|chr10 (128321870-128321720)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               83-276, gnl|bosTau2|chr19 (32527872-32527679)
               

               
               83-276, gnl|Hg17|chr17 (35333997-35333808)
               

               
               83-276, gnl|Mm7|chr11 (98693175-98692980)
               


               
               279-429, gnl|bosTau2|chr5 (35054082-35053932)
               

               
               279-429, gnl|Hg17|chr12 (54499396-54499546)
               

               
               279-429, gnl|Mm7|chr10 (128321870-128321720)

	83-276, gnl\|bosTau2\|chr19 (32527872-32527679)
	83-276, gnl\|Hg17\|chr17 (35333997-35333808)
	83-276, gnl\|Mm7\|chr11 (98693175-98692980)

	279-429, gnl\|bosTau2\|chr5 (35054082-35053932)
	279-429, gnl\|Hg17\|chr12 (54499396-54499546)
	279-429, gnl\|Mm7\|chr10 (128321870-128321720)