Non-Coding RNA Search

Ss1.1-Liv1-LVRM1E080208.5

Sequence:


               
               TTCCCTTTCCAAGGCTCCTCCGGCGAGTGGCAGCGGATCGGGCGCTTCTCGGCCGATTTT
CTGCCTGCTGGGCCTGCGGCTCTGGTGGGCATTGGCCGGCCGCCGGGCCCCTGGATCCAT
CTGGGGTGCATTTCCTCGAAAGCGTGGGCCTCGAAGCCCCGGGGCGGGCGCGGCCGCGGC
TGGCGCGTCTCCTAGATACACCAAACCAGGGCAGGGAGCTGGGCTGCAGTGTTCAGGAGG
TTTCCCAGGGCCTGGCTCATGGTCCTCCTCGAGACCCCGGTGACCGTCACATCAGTGGGA
ATGAATGACTGGCACAGGATCTTTGACCAGAACCCGCTGGTCCCTCCCCACCCACAGAGA
GCCCGCCAGCCTCTCAAGGAGTCGATGGCATTTCAGTGTGTCCTGAAGGGGCTCGATGGC
CCGCTAATTAAGCAGGGCGTGCTGGAGGGCCTGTCGGGCGTGGGGTGCCACCTGCGCGTG
TCTCTCTTTGACGTCACCTACCGACACTTCTTCGGGAGGACATGGAAGAGCGTGACGAGG
CCGGCTGAGCAGCTTTCCAGGCAGCCGCCCAGGATTGTCTTCAATGAGCCCTTGTATTTT
CACACGTCCTTAAACCACCCTAACATTGTGGCCGTGCTCGAGGTGGTCACCGAAGCAGGA
CGCGGGACGGGACCCTCCAGACGTTGTCCTGTGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCCTTTCCAAGGCTCCTCCGGCGAGTGGCAGCGGATCGGGCGCTTCTCGGCCGATTTT
CTGCCTGCTGGGCCTGCGGCTCTGGTGGGCATTGGCCGGCCGCCGGGCCCCTGGATCCAT
CTGGGGTGCATTTCCTCGAAAGCGTGGGCCTCGAAGCCCCGGGGCGGGCGCGGCCGCGGC
TGGCGCGTCTCCTAGATACACCAAACCAGGGCAGGGAGCTGGGCTGCAGTGTTCAGGAGG
TTTCCCAGGGCCTGGCTCATGGTCCTCCTCGAGACCCCGGTGACCGTCACATCAGTGGGA
ATGAATGACTGGCACAGGATCTTTGACCAGAACCCGCTGGTCCCTCCCCACCCACAGAGA
GCCCGCCAGCCTCTCAAGGAGTCGATGGCATTTCAGTGTGTCCTGAAGGGGCTCGATGGC
CCGCTAATTAAGCAGGGCGTGCTGGAGGGCCTGTCGGGCGTGGGGTGCCACCTGCGCGTG
TCTCTCTTTGACGTCACCTACCGACACTTCTTCGGGAGGACATGGAAGAGCGTGACGAGG
CCGGCTGAGCAGCTTTCCAGGCAGCCGCCCAGGATTGTCTTCAATGAGCCCTTGTATTTT
CACACGTCCTTAAACCACCCTAACATTGTGGCCGTGCTCGAGGTGGTCACCGAAGCAGGA
CGCGGGACGGGACCCTCCAGACGTTGTCCTGTGGGT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|12854873|dbj|BAB30156.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12854873|dbj|BAB30156.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               261-436, gnl|bosTau2|chr16 (35154603-35154777)
               

               
               261-436, gnl|Hg17|chr1 (5980654-5980480)
               

               
               261-436, gnl|Mm7|chr4 (151473910-151474083)
               


               
               587-696, gnl|bosTau2|chr16 (35174510-35174620)
               

               
               587-696, gnl|Hg17|chr1 (5963587-5963477)
               

               
               587-696, gnl|Mm7|chr4 (151486189-151486299)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               261-436, gnl|bosTau2|chr16 (35154603-35154777)
               

               
               261-436, gnl|Hg17|chr1 (5980654-5980480)
               

               
               261-436, gnl|Mm7|chr4 (151473910-151474083)
               


               
               587-696, gnl|bosTau2|chr16 (35174510-35174620)
               

               
               587-696, gnl|Hg17|chr1 (5963587-5963477)
               

               
               587-696, gnl|Mm7|chr4 (151486189-151486299)

	261-436, gnl\|bosTau2\|chr16 (35154603-35154777)
	261-436, gnl\|Hg17\|chr1 (5980654-5980480)
	261-436, gnl\|Mm7\|chr4 (151473910-151474083)

	587-696, gnl\|bosTau2\|chr16 (35174510-35174620)
	587-696, gnl\|Hg17\|chr1 (5963587-5963477)
	587-696, gnl\|Mm7\|chr4 (151486189-151486299)