Non-Coding RNA Search

Ss1.1-Liv1-LVRM1G040094.5

Sequence:


               
               ATTTCCGGCTCCGGTATCATGGACGGCTCCTACCCAGAAGAGTCTCACACTGCGGTTGGT
GGGAAGAGGCAGCAGTTTGGGAGCCGGTTCCTGAGCGACCCGGCTCGCGTTTTCCACCAC
AATGCCTGGGACAATGTGGAGTGGTCGGAAGAGCAGGCCGCCGCGGCGGAAAGGAAAGTC
CAGGAGAACAGTAGCCAGCGCGTGTGCCAGGAAAAGCAAGTTGATTATGAGATCAATGCC
AACAAATATTGGAACGACTTCTACAAAATTCATGAAAATGGGTTTTTCAAGGATAGACAT
TGGCTTTTTACTGAATTCCCAGAGCTAGCACCTATCCAAAACCAAAATCACTTGAAGGAA
TTGCTCTCAGAGAAAAAGAGGAGTGAAGTACCTGAATGTAAAAGCAGCGAGGATGGATCT
GGTTTAAAAATAGAACAGCAGGATTGTTCTTCAGTCAGCCTTGGACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTCCGGCTCCGGTATCATGGACGGCTCCTACCCAGAAGAGTCTCACACTGCGGTTGGT
GGGAAGAGGCAGCAGTTTGGGAGCCGGTTCCTGAGCGACCCGGCTCGCGTTTTCCACCAC
AATGCCTGGGACAATGTGGAGTGGTCGGAAGAGCAGGCCGCCGCGGCGGAAAGGAAAGTC
CAGGAGAACAGTAGCCAGCGCGTGTGCCAGGAAAAGCAAGTTGATTATGAGATCAATGCC
AACAAATATTGGAACGACTTCTACAAAATTCATGAAAATGGGTTTTTCAAGGATAGACAT
TGGCTTTTTACTGAATTCCCAGAGCTAGCACCTATCCAAAACCAAAATCACTTGAAGGAA
TTGCTCTCAGAGAAAAAGAGGAGTGAAGTACCTGAATGTAAAAGCAGCGAGGATGGATCT
GGTTTAAAAATAGAACAGCAGGATTGTTCTTCAGTCAGCCTTGGACAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|6841184|gb|AAF28945.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|6841184|gb|AAF28945.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               2-129, gnl|bosTau2|chr19 (39263554-39263681)
               

               
               2-129, gnl|Hg17|chr17 (57854979-57855106)
               

               
               2-129, gnl|Mm7|chr11 (105235521-105235648)
               


               
               219-468, gnl|bosTau2|chr19 (39265660-39265909)
               

               
               219-468, gnl|Hg17|chr17 (57857390-57857639)
               

               
               219-468, gnl|Mm7|chr11 (105237780-105238008)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-129, gnl|bosTau2|chr19 (39263554-39263681)
               

               
               2-129, gnl|Hg17|chr17 (57854979-57855106)
               

               
               2-129, gnl|Mm7|chr11 (105235521-105235648)
               


               
               219-468, gnl|bosTau2|chr19 (39265660-39265909)
               

               
               219-468, gnl|Hg17|chr17 (57857390-57857639)
               

               
               219-468, gnl|Mm7|chr11 (105237780-105238008)

	2-129, gnl\|bosTau2\|chr19 (39263554-39263681)
	2-129, gnl\|Hg17\|chr17 (57854979-57855106)
	2-129, gnl\|Mm7\|chr11 (105235521-105235648)

	219-468, gnl\|bosTau2\|chr19 (39265660-39265909)
	219-468, gnl\|Hg17\|chr17 (57857390-57857639)
	219-468, gnl\|Mm7\|chr11 (105237780-105238008)