Non-Coding RNA Search

Ss1.1-Lng1-LNG010009A12.5

Sequence:


               
               ACTGAGCAAGGAGCGAGCCGAGCGGCCGTCGCCCGAGTGGAGCCGCTCCGCCAGCCCGCC
GCCCGCCAGCCTGCGCTCCAGTCCGCCGTGTCTAGCAGCGGGGCCCAGCATGGTCATGGC
GGATGGCCCGAGGCACTTGCAGCGCGGGCCGGTCCGGGTGGGGTTCTACGAAATCGAGGG
CACGCTGGGCAAGGGCAACTTCGCCGTGGTGAAGCTGGGGCGGCACCGGATCACCAGGAC
GGAGGTGGCAATAAAAATAATAGATAAATCTCAGCTGGATGCAGTGAACCTTGAGAAAAT
CTACCGAGAAGTACAAATAATGAAAATGTTAGACCACCCTCACATAATCAAACTTTATCA
GGTAATGGAAACCAAAAGCATGTTGTATCTTGTGACAGAATATGCCAAAAATGGAGAAAT
TTTTGACTACCTTGCTAATCACGGCCGGTTAAATGAGTCCGAGGCCAGGCGCAAATTCTG
GCAAATCCTGTCTGCTGTTGATTACTGTCACGGTCGGAAGATTGTGCACCGTGACCTCAA
GGCTGAAAATCTCCTGCTGGATAACAACATGAATATCAAAATAGCAGATTTCGGTTTTGG
AAATTTCTTTAAAAGTGGTGAACTGCTGGCAACATGGTGTGGCAGCCCCCCTTATGCAGC
CCCAGAAGTCTTTGAAGGGCAGCAGTATGAAGGACCACAGCTGGATATTTGGAGCATGGG
AGTCGTTCTTTATGTCCTTGTCTGTGGAGCTCTTCCTTTTGATGGACCGACGCTTCCAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGAGCAAGGAGCGAGCCGAGCGGCCGTCGCCCGAGTGGAGCCGCTCCGCCAGCCCGCC
GCCCGCCAGCCTGCGCTCCAGTCCGCCGTGTCTAGCAGCGGGGCCCAGCATGGTCATGGC
GGATGGCCCGAGGCACTTGCAGCGCGGGCCGGTCCGGGTGGGGTTCTACGAAATCGAGGG
CACGCTGGGCAAGGGCAACTTCGCCGTGGTGAAGCTGGGGCGGCACCGGATCACCAGGAC
GGAGGTGGCAATAAAAATAATAGATAAATCTCAGCTGGATGCAGTGAACCTTGAGAAAAT
CTACCGAGAAGTACAAATAATGAAAATGTTAGACCACCCTCACATAATCAAACTTTATCA
GGTAATGGAAACCAAAAGCATGTTGTATCTTGTGACAGAATATGCCAAAAATGGAGAAAT
TTTTGACTACCTTGCTAATCACGGCCGGTTAAATGAGTCCGAGGCCAGGCGCAAATTCTG
GCAAATCCTGTCTGCTGTTGATTACTGTCACGGTCGGAAGATTGTGCACCGTGACCTCAA
GGCTGAAAATCTCCTGCTGGATAACAACATGAATATCAAAATAGCAGATTTCGGTTTTGG
AAATTTCTTTAAAAGTGGTGAACTGCTGGCAACATGGTGTGGCAGCCCCCCTTATGCAGC
CCCAGAAGTCTTTGAAGGGCAGCAGTATGAAGGACCACAGCTGGATATTTGGAGCATGGG
AGTCGTTCTTTATGTCCTTGTCTGTGGAGCTCTTCCTTTTGATGGACCGACGCTTCCAAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8C1B3_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8C1B3_MOUSE

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               11-247, gnl|bosTau2|chr25 (5450955-5450718)
               

               
               11-247, gnl|Hg17|chr11 (110978426-110978635)
               

               
               11-247, gnl|Mm7|chr9 (50987561-50987320)
               


               
               540-770, gnl|bosTau2|chr16 (11003038-11002808)
               

               
               540-770, gnl|Hg17|chr1 (217180045-217180275)
               

               
               540-770, gnl|Mm7|chr1 (184445335-184445105)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-247, gnl|bosTau2|chr25 (5450955-5450718)
               

               
               11-247, gnl|Hg17|chr11 (110978426-110978635)
               

               
               11-247, gnl|Mm7|chr9 (50987561-50987320)
               


               
               540-770, gnl|bosTau2|chr16 (11003038-11002808)
               

               
               540-770, gnl|Hg17|chr1 (217180045-217180275)
               

               
               540-770, gnl|Mm7|chr1 (184445335-184445105)

	11-247, gnl\|bosTau2\|chr25 (5450955-5450718)
	11-247, gnl\|Hg17\|chr11 (110978426-110978635)
	11-247, gnl\|Mm7\|chr9 (50987561-50987320)

	540-770, gnl\|bosTau2\|chr16 (11003038-11002808)
	540-770, gnl\|Hg17\|chr1 (217180045-217180275)
	540-770, gnl\|Mm7\|chr1 (184445335-184445105)